ID Reference Position Consensus Position Variation Type Length Reference Variants Allele Variations Frequencies Counts Coverage Variant #1 Frequency of #1 Count of #1 Variant #2 Frequency of #2 Count of #2 Overlapping Annotations Amino Acid Change ConsensusfromContig62 227 199 SNP 1 G 1 A 80 8 10 A 80 8 ConsensusfromContig87 157 152 SNP 1 C 1 T 70 7 10 T 70 7 ConsensusfromContig88 227 124 SNP 1 G 1 A 100 10 10 A 100 10 ConsensusfromContig202 235 222 SNP 1 C 1 T 100 10 10 T 100 10 ConsensusfromContig256 149 138 SNP 1 C 1 T 90 9 10 T 90 9 ConsensusfromContig350 55 55 SNP 1 A 1 T 80 8 10 T 80 8 ConsensusfromContig370 104 101 SNP 1 G 1 A 100 10 10 A 100 10 ConsensusfromContig565 243 194 SNP 1 C 2 C/A 60.0/40.0 6/4 10 C 60 6 A 40 4 ConsensusfromContig660 97 68 SNP 1 C 1 T 100 10 10 T 100 10 ConsensusfromContig786 288 216 SNP 1 T 2 T/C 60.0/40.0 6/4 10 T 60 6 C 40 4 ConsensusfromContig943 88 41 SNP 1 G 1 C 100 10 10 C 100 10 ConsensusfromContig1137 426 320 SNP 1 A 1 T 90 9 10 T 90 9 ConsensusfromContig1172 275 258 SNP 1 A 1 G 100 10 10 G 100 10 ConsensusfromContig1186 182 158 SNP 1 T 1 C 100 10 10 C 100 10 ConsensusfromContig1206 299 208 SNP 1 G 2 A/G 50.0/50.0 5/5 10 A 50 5 G 50 5 ConsensusfromContig1207 348 309 SNP 1 A 2 A/G 50.0/50.0 5/5 10 A 50 5 G 50 5 ConsensusfromContig1256 20 20 SNP 1 A 1 G 80 8 10 G 80 8 ConsensusfromContig1418 188 188 SNP 1 A 2 A/G 60.0/40.0 6/4 10 A 60 6 G 40 4 ConsensusfromContig1425 94 65 SNP 1 T 1 A 100 10 10 A 100 10 ConsensusfromContig1569 349 337 SNP 1 A 1 T 80 8 10 T 80 8 ConsensusfromContig1683 285 181 SNP 1 A 2 A/T 60.0/40.0 6/4 10 A 60 6 T 40 4 ConsensusfromContig1707 268 252 SNP 1 C 1 T 100 10 10 T 100 10 ConsensusfromContig1759 283 252 SNP 1 G 2 T/G 60.0/40.0 6/4 10 T 60 6 G 40 4 ConsensusfromContig1775 123 117 SNP 1 G 2 A/G 60.0/40.0 6/4 10 A 60 6 G 40 4 ConsensusfromContig1957 53 51 SNP 1 A 2 G/A 60.0/40.0 6/4 10 G 60 6 A 40 4 ConsensusfromContig1976 420 345 SNP 1 T 1 C 70 7 10 C 70 7 ConsensusfromContig1982 315 122 SNP 1 C 2 C/T 60.0/40.0 6/4 10 C 60 6 T 40 4 ConsensusfromContig2021 537 502 SNP 1 A 2 A/G 60.0/40.0 6/4 10 A 60 6 G 40 4 ConsensusfromContig2093 39 37 SNP 1 A 1 C 90 9 10 C 90 9 ConsensusfromContig2113 120 72 SNP 1 A 1 G 100 10 10 G 100 10 ConsensusfromContig2177 154 149 Complex SNP 1 T 2 A/C 50.0/50.0 5/5 10 A 50 5 C 50 5 ConsensusfromContig2177 443 421 SNP 1 G 1 A 80 8 10 A 80 8 ConsensusfromContig2283 462 385 SNP 1 C 2 T/C 60.0/40.0 6/4 10 T 60 6 C 40 4 ConsensusfromContig2304 19 8 SNP 1 T 1 C 100 10 10 C 100 10 ConsensusfromContig2366 64 55 SNP 1 A 1 G 100 10 10 G 100 10 ConsensusfromContig2479 90 84 SNP 1 T 2 A/T 60.0/40.0 6/4 10 A 60 6 T 40 4 ConsensusfromContig2514 129 126 SNP 1 C 1 T 100 10 10 T 100 10 ConsensusfromContig2547 84 69 SNP 1 A 2 A/T 50.0/50.0 5/5 10 A 50 5 T 50 5 ConsensusfromContig2613 238 205 SNP 1 A 1 G 70 7 10 G 70 7 ConsensusfromContig2618 103 103 SNP 1 C 2 C/T 50.0/50.0 5/5 10 C 50 5 T 50 5 ConsensusfromContig2641 753 572 SNP 1 G 2 A/G 50.0/50.0 5/5 10 A 50 5 G 50 5 ConsensusfromContig2758 206 206 SNP 1 G 1 A 100 10 10 A 100 10 ConsensusfromContig2761 171 102 SNP 1 G 2 A/G 50.0/50.0 5/5 10 A 50 5 G 50 5 ConsensusfromContig2796 255 230 SNP 1 T 2 T/G 60.0/40.0 6/4 10 T 60 6 G 40 4 ConsensusfromContig2798 149 97 SNP 1 C 1 T 100 10 10 T 100 10 ConsensusfromContig2820 222 153 SNP 1 T 2 T/A 60.0/40.0 6/4 10 T 60 6 A 40 4 ConsensusfromContig2857 222 166 SNP 1 G 1 A 70 7 10 A 70 7 ConsensusfromContig3110 216 116 SNP 1 T 1 C 70 7 10 C 70 7 ConsensusfromContig3166 453 433 SNP 1 C 1 T 70 7 10 T 70 7 ConsensusfromContig3172 676 424 SNP 1 C 2 C/T 60.0/40.0 6/4 10 C 60 6 T 40 4 ConsensusfromContig3202 102 43 SNP 1 G 2 T/G 60.0/40.0 6/4 10 T 60 6 G 40 4 ConsensusfromContig3248 971 638 SNP 1 G 1 A 70 7 10 A 70 7 ConsensusfromContig3270 183 94 SNP 1 A 1 G 90 9 10 G 90 9 ConsensusfromContig3301 39 32 SNP 1 G 2 A/G 50.0/50.0 5/5 10 A 50 5 G 50 5 ConsensusfromContig3330 277 260 SNP 1 A 2 A/T 50.0/50.0 5/5 10 A 50 5 T 50 5 ConsensusfromContig3341 418 160 Complex SNP 1 A 2 T/C 50.0/40.0 5/4 10 T 50 5 C 40 4 ConsensusfromContig3361 418 389 SNP 1 C 1 T 100 10 10 T 100 10 ConsensusfromContig3432 224 139 SNP 1 C 1 T 100 10 10 T 100 10 ConsensusfromContig3572 286 220 SNP 1 T 1 A 100 10 10 A 100 10 ConsensusfromContig3715 72 72 SNP 1 G 2 G/A 60.0/40.0 6/4 10 G 60 6 A 40 4 ConsensusfromContig3771 49 49 SNP 1 T 1 G 100 10 10 G 100 10 ConsensusfromContig3895 171 171 SNP 1 T 1 C 100 10 10 C 100 10 ConsensusfromContig4005 192 184 SNP 1 A 1 G 100 10 10 G 100 10 ConsensusfromContig4081 14 5 SNP 1 T 1 C 100 10 10 C 100 10 ConsensusfromContig4187 43 35 SNP 1 A 1 G 100 10 10 G 100 10 ConsensusfromContig4433 209 178 SNP 1 C 1 T 100 10 10 T 100 10 ConsensusfromContig4467 220 196 SNP 1 A 1 C 100 10 10 C 100 10 ConsensusfromContig4522 323 286 SNP 1 A 2 A/T 60.0/40.0 6/4 10 A 60 6 T 40 4 ConsensusfromContig4539 184 146 SNP 1 A 1 T 80 8 10 T 80 8 ConsensusfromContig4582 213 120 SNP 1 G 1 T 100 10 10 T 100 10 ConsensusfromContig4765 246 194 SNP 1 T 1 G 90 9 10 G 90 9 ConsensusfromContig4937 98 86 SNP 1 G 1 T 70 7 10 T 70 7 ConsensusfromContig4950 115 110 SNP 1 G 2 A/G 60.0/40.0 6/4 10 A 60 6 G 40 4 ConsensusfromContig5044 121 93 SNP 1 T 2 G/T 60.0/40.0 6/4 10 G 60 6 T 40 4 ConsensusfromContig5089 99 48 SNP 1 G 1 A 100 10 10 A 100 10 ConsensusfromContig5092 838 807 SNP 1 A 1 G 100 10 10 G 100 10 ConsensusfromContig5131 305 233 SNP 1 G 2 T/G 60.0/40.0 6/4 10 T 60 6 G 40 4 ConsensusfromContig5140 272 272 SNP 1 C 1 T 80 8 10 T 80 8 ConsensusfromContig5140 380 380 SNP 1 T 2 T/C 60.0/40.0 6/4 10 T 60 6 C 40 4 ConsensusfromContig5145 25 24 SNP 1 T 1 C 100 10 10 C 100 10 ConsensusfromContig5160 388 363 SNP 1 C 1 T 90 9 10 T 90 9 ConsensusfromContig5172 249 202 SNP 1 C 2 C/T 60.0/40.0 6/4 10 C 60 6 T 40 4 ConsensusfromContig5205 516 496 SNP 1 T 1 C 70 7 10 C 70 7 ConsensusfromContig5362 357 345 SNP 1 G 1 T 70 7 10 T 70 7 ConsensusfromContig5438 394 370 SNP 1 A 1 G 100 10 10 G 100 10 ConsensusfromContig5600 303 296 SNP 1 G 1 A 80 8 10 A 80 8 ConsensusfromContig5644 287 204 SNP 1 G 2 G/T 60.0/40.0 6/4 10 G 60 6 T 40 4 ConsensusfromContig5758 208 207 SNP 1 A 2 A/G 60.0/40.0 6/4 10 A 60 6 G 40 4 ConsensusfromContig5758 305 304 SNP 1 G 1 A 90 9 10 A 90 9 ConsensusfromContig5821 290 20 SNP 1 T 1 C 80 8 10 C 80 8 ConsensusfromContig5904 431 222 SNP 1 T 2 T/C 60.0/40.0 6/4 10 T 60 6 C 40 4 ConsensusfromContig5962 211 191 SNP 1 G 2 G/T 60.0/40.0 6/4 10 G 60 6 T 40 4 ConsensusfromContig6007 231 177 SNP 1 T 2 T/C 60.0/40.0 6/4 10 T 60 6 C 40 4 ConsensusfromContig6168 40 40 SNP 1 T 2 G/T 60.0/40.0 6/4 10 G 60 6 T 40 4 ConsensusfromContig6217 84 84 SNP 1 G 1 C 100 10 10 C 100 10 ConsensusfromContig6291 108 82 SNP 1 A 2 C/A 60.0/40.0 6/4 10 C 60 6 A 40 4 ConsensusfromContig6312 348 348 SNP 1 G 1 A 100 10 10 A 100 10 ConsensusfromContig6339 238 207 SNP 1 T 2 C/T 50.0/50.0 5/5 10 C 50 5 T 50 5 ConsensusfromContig6523 312 270 SNP 1 C 1 T 100 10 10 T 100 10 ConsensusfromContig6546 437 396 SNP 1 G 2 A/G 50.0/50.0 5/5 10 A 50 5 G 50 5 ConsensusfromContig6677 239 239 SNP 1 A 2 C/A 60.0/40.0 6/4 10 C 60 6 A 40 4 ConsensusfromContig6790 57 48 SNP 1 C 1 A 90 9 10 A 90 9 ConsensusfromContig6838 46 39 SNP 1 T 1 C 80 8 10 C 80 8 ConsensusfromContig6903 100 98 SNP 1 C 2 C/G 50.0/40.0 5/4 10 C 50 5 G 40 4 ConsensusfromContig6987 97 50 SNP 1 G 1 A 100 10 10 A 100 10 ConsensusfromContig7007 288 264 SNP 1 C 1 T 100 10 10 T 100 10 ConsensusfromContig7375 378 169 SNP 1 A 1 G 90 9 10 G 90 9 ConsensusfromContig7411 189 189 SNP 1 C 1 T 70 7 10 T 70 7 ConsensusfromContig7413 260 221 SNP 1 G 2 G/C 60.0/40.0 6/4 10 G 60 6 C 40 4 ConsensusfromContig7470 48 41 SNP 1 A 1 G 80 8 10 G 80 8 ConsensusfromContig7498 57 57 SNP 1 A 2 A/C 60.0/40.0 6/4 10 A 60 6 C 40 4 ConsensusfromContig7500 338 131 SNP 1 T 1 C 90 9 10 C 90 9 ConsensusfromContig7500 348 141 SNP 1 G 1 T 90 9 10 T 90 9 ConsensusfromContig7728 346 234 SNP 1 T 2 C/T 50.0/50.0 5/5 10 C 50 5 T 50 5 ConsensusfromContig7839 326 302 SNP 1 G 1 A 100 10 10 A 100 10 ConsensusfromContig7854 646 445 SNP 1 T 2 T/C 60.0/40.0 6/4 10 T 60 6 C 40 4 ConsensusfromContig8090 207 135 SNP 1 A 1 G 70 7 10 G 70 7 ConsensusfromContig8090 345 259 SNP 1 A 2 A/G 60.0/40.0 6/4 10 A 60 6 G 40 4 ConsensusfromContig8091 209 175 SNP 1 T 1 C 100 10 10 C 100 10 ConsensusfromContig8111 950 679 SNP 1 G 2 A/G 50.0/50.0 5/5 10 A 50 5 G 50 5 ConsensusfromContig8169 294 232 SNP 1 G 2 G/C 60.0/40.0 6/4 10 G 60 6 C 40 4 ConsensusfromContig8336 263 261 SNP 1 T 1 C 90 9 10 C 90 9 ConsensusfromContig8515 88 23 SNP 1 T 1 G 70 7 10 G 70 7 ConsensusfromContig8522 440 305 SNP 1 G 1 A 70 7 10 A 70 7 ConsensusfromContig8528 108 108 SNP 1 A 2 G/A 60.0/40.0 6/4 10 G 60 6 A 40 4 ConsensusfromContig8618 292 249 SNP 1 C 1 T 100 10 10 T 100 10 ConsensusfromContig8647 212 100 SNP 1 C 2 C/A 60.0/40.0 6/4 10 C 60 6 A 40 4 ConsensusfromContig8848 344 336 SNP 1 C 2 C/A 60.0/40.0 6/4 10 C 60 6 A 40 4 ConsensusfromContig8853 183 183 SNP 1 A 1 G 100 10 10 G 100 10 ConsensusfromContig8858 230 86 SNP 1 G 1 A 80 8 10 A 80 8 ConsensusfromContig8995 198 198 SNP 1 C 1 G 100 10 10 G 100 10 ConsensusfromContig9006 67 67 SNP 1 A 2 C/A 60.0/40.0 6/4 10 C 60 6 A 40 4 ConsensusfromContig9223 277 220 SNP 1 C 1 T 100 10 10 T 100 10 ConsensusfromContig9237 20 15 SNP 1 A 1 T 100 10 10 T 100 10 ConsensusfromContig94 127 18 SNP 1 T 1 G 90.9 10 11 G 90.90909091 10 ConsensusfromContig280 141 116 SNP 1 C 1 T 100 11 11 T 100 11 ConsensusfromContig467 255 253 SNP 1 A 1 C 90.9 10 11 C 90.90909091 10 ConsensusfromContig508 127 79 SNP 1 C 2 C/G 54.5/45.5 6/5 11 C 54.54545455 6 G 45.45454545 5 ConsensusfromContig564 94 94 SNP 1 T 2 T/C 54.5/45.5 6/5 11 T 54.54545455 6 C 45.45454545 5 ConsensusfromContig643 81 71 SNP 1 T 1 A 72.7 8 11 A 72.72727273 8 ConsensusfromContig704 136 105 SNP 1 A 1 C 100 11 11 C 100 11 ConsensusfromContig805 104 80 SNP 1 A 1 C 100 11 11 C 100 11 ConsensusfromContig829 141 84 SNP 1 G 2 A/G 54.5/45.5 6/5 11 A 54.54545455 6 G 45.45454545 5 ConsensusfromContig1126 46 43 SNP 1 C 1 A 63.6 7 11 A 63.63636364 7 ConsensusfromContig1187 324 211 SNP 1 C 1 T 100 11 11 T 100 11 ConsensusfromContig1216 128 62 SNP 1 G 2 T/G 63.6/36.4 7/4 11 T 63.63636364 7 G 36.36363636 4 ConsensusfromContig1398 184 153 SNP 1 T 2 T/C 54.5/45.5 6/5 11 T 54.54545455 6 C 45.45454545 5 ConsensusfromContig1452 85 36 SNP 1 C 2 C/T 63.6/36.4 7/4 11 C 63.63636364 7 T 36.36363636 4 ConsensusfromContig1474 607 545 SNP 1 A 1 G 100 11 11 G 100 11 ConsensusfromContig1508 372 370 SNP 1 G 1 T 81.8 9 11 T 81.81818182 9 ConsensusfromContig1521 133 133 SNP 1 A 2 A/G 63.6/36.4 7/4 11 A 63.63636364 7 G 36.36363636 4 ConsensusfromContig1750 435 287 SNP 1 G 1 A 90.9 10 11 A 90.90909091 10 ConsensusfromContig1787 640 129 SNP 1 G 1 A 81.8 9 11 A 81.81818182 9 ConsensusfromContig1932 37 23 SNP 1 A 2 A/T 63.6/36.4 7/4 11 A 63.63636364 7 T 36.36363636 4 ConsensusfromContig1932 38 24 SNP 1 A 2 A/C 63.6/36.4 7/4 11 A 63.63636364 7 C 36.36363636 4 ConsensusfromContig1942 353 298 SNP 1 T 1 G 100 11 11 G 100 11 ConsensusfromContig2028 363 215 SNP 1 A 1 G 100 11 11 G 100 11 ConsensusfromContig2119 493 306 SNP 1 A 1 G 100 11 11 G 100 11 ConsensusfromContig2203 62 38 SNP 1 C 1 T 100 11 11 T 100 11 ConsensusfromContig2211 38 38 SNP 1 C 1 T 90.9 10 11 T 90.90909091 10 ConsensusfromContig2245 229 224 SNP 1 G 2 G/C 63.6/36.4 7/4 11 G 63.63636364 7 C 36.36363636 4 ConsensusfromContig2298 351 305 SNP 1 A 1 G 100 11 11 G 100 11 ConsensusfromContig2305 307 273 SNP 1 A 1 G 100 11 11 G 100 11 ConsensusfromContig2330 100 100 SNP 1 T 2 T/A 54.5/45.5 6/5 11 T 54.54545455 6 A 45.45454545 5 ConsensusfromContig2447 92 65 SNP 1 A 1 G 100 11 11 G 100 11 ConsensusfromContig2508 240 234 SNP 1 A 1 C 72.7 8 11 C 72.72727273 8 ConsensusfromContig2585 85 85 SNP 1 C 1 T 100 11 11 T 100 11 ConsensusfromContig2613 123 106 SNP 1 G 2 G/A 54.5/45.5 6/5 11 G 54.54545455 6 A 45.45454545 5 ConsensusfromContig2613 269 236 SNP 1 C 1 T 81.8 9 11 T 81.81818182 9 ConsensusfromContig2617 388 302 SNP 1 C 1 T 100 11 11 T 100 11 ConsensusfromContig2644 153 153 SNP 1 T 2 T/G 54.5/45.5 6/5 11 T 54.54545455 6 G 45.45454545 5 ConsensusfromContig2644 231 228 SNP 1 T 1 G 90.9 10 11 G 90.90909091 10 ConsensusfromContig2681 299 200 SNP 1 A 2 A/G 63.6/36.4 7/4 11 A 63.63636364 7 G 36.36363636 4 ConsensusfromContig2761 193 124 SNP 1 G 2 T/G 63.6/36.4 7/4 11 T 63.63636364 7 G 36.36363636 4 ConsensusfromContig2790 244 207 SNP 1 T 2 T/C 63.6/36.4 7/4 11 T 63.63636364 7 C 36.36363636 4 ConsensusfromContig2872 130 113 SNP 1 C 1 T 90.9 10 11 T 90.90909091 10 ConsensusfromContig3021 512 333 SNP 1 G 2 G/C 54.5/45.5 6/5 11 G 54.54545455 6 C 45.45454545 5 ConsensusfromContig3098 180 133 SNP 1 A 1 G 72.7 8 11 G 72.72727273 8 ConsensusfromContig3153 97 95 SNP 1 C 1 A 72.7 8 11 A 72.72727273 8 ConsensusfromContig3165 1026 790 SNP 1 G 1 A 81.8 9 11 A 81.81818182 9 ConsensusfromContig3166 362 342 SNP 1 T 2 T/G 54.5/45.5 6/5 11 T 54.54545455 6 G 45.45454545 5 ConsensusfromContig3177 301 204 SNP 1 A 2 A/T 54.5/45.5 6/5 11 A 54.54545455 6 T 45.45454545 5 ConsensusfromContig3294 172 156 SNP 1 A 1 G 100 11 11 G 100 11 ConsensusfromContig3294 231 201 SNP 1 A 1 G 81.8 9 11 G 81.81818182 9 ConsensusfromContig3294 336 306 SNP 1 C 2 C/T 54.5/45.5 6/5 11 C 54.54545455 6 T 45.45454545 5 ConsensusfromContig3373 177 140 SNP 1 G 1 A 90.9 10 11 A 90.90909091 10 ConsensusfromContig3554 223 190 SNP 1 T 2 C/T 54.5/45.5 6/5 11 C 54.54545455 6 T 45.45454545 5 ConsensusfromContig3554 292 259 SNP 1 C 2 C/T 54.5/45.5 6/5 11 C 54.54545455 6 T 45.45454545 5 ConsensusfromContig3771 153 133 SNP 1 G 2 A/G 63.6/36.4 7/4 11 A 63.63636364 7 G 36.36363636 4 ConsensusfromContig3865 143 119 SNP 1 G 1 A 100 11 11 A 100 11 ConsensusfromContig3872 362 303 SNP 1 A 1 T 100 11 11 T 100 11 ConsensusfromContig3885 362 166 SNP 1 T 2 G/T 63.6/36.4 7/4 11 G 63.63636364 7 T 36.36363636 4 ConsensusfromContig3947 159 125 SNP 1 T 2 T/A 54.5/36.4 6/4 11 T 54.54545455 6 A 36.36363636 4 ConsensusfromContig3958 102 102 SNP 1 C 2 T/C 54.5/45.5 6/5 11 T 54.54545455 6 C 45.45454545 5 ConsensusfromContig3958 421 415 SNP 1 C 1 T 100 11 11 T 100 11 ConsensusfromContig4028 209 205 SNP 1 A 1 G 100 11 11 G 100 11 ConsensusfromContig4037 434 434 SNP 1 A 2 A/T 63.6/36.4 7/4 11 A 63.63636364 7 T 36.36363636 4 ConsensusfromContig4123 42 32 SNP 1 G 2 T/G 63.6/36.4 7/4 11 T 63.63636364 7 G 36.36363636 4 ConsensusfromContig4249 75 75 SNP 1 C 1 T 100 11 11 T 100 11 ConsensusfromContig4279 225 200 SNP 1 A 1 G 100 11 11 G 100 11 ConsensusfromContig4433 191 160 SNP 1 C 1 T 72.7 8 11 T 72.72727273 8 ConsensusfromContig4581 190 159 SNP 1 G 2 G/C 54.5/45.5 6/5 11 G 54.54545455 6 C 45.45454545 5 ConsensusfromContig4644 653 342 SNP 1 A 2 A/C 63.6/36.4 7/4 11 A 63.63636364 7 C 36.36363636 4 ConsensusfromContig4644 654 343 SNP 1 G 2 G/T 63.6/36.4 7/4 11 G 63.63636364 7 T 36.36363636 4 ConsensusfromContig4712 303 279 SNP 1 G 2 T/G 63.6/36.4 7/4 11 T 63.63636364 7 G 36.36363636 4 ConsensusfromContig4764 162 141 SNP 1 G 1 T 90.9 10 11 T 90.90909091 10 ConsensusfromContig4898 341 341 SNP 1 C 2 C/A 54.5/45.5 6/5 11 C 54.54545455 6 A 45.45454545 5 ConsensusfromContig5044 124 96 SNP 1 G 2 A/G 63.6/36.4 7/4 11 A 63.63636364 7 G 36.36363636 4 ConsensusfromContig5091 40 10 SNP 1 A 1 C 90.9 10 11 C 90.90909091 10 ConsensusfromContig5106 604 535 SNP 1 A 1 G 100 11 11 G 100 11 ConsensusfromContig5164 33 33 SNP 1 N 1 T 100 11 11 T 100 11 ConsensusfromContig5180 60 35 SNP 1 C 2 C/G 54.5/36.4 6/4 11 C 54.54545455 6 G 36.36363636 4 ConsensusfromContig5449 234 25 SNP 1 G 2 G/A 63.6/36.4 7/4 11 G 63.63636364 7 A 36.36363636 4 ConsensusfromContig5461 185 90 SNP 1 A 1 G 100 11 11 G 100 11 ConsensusfromContig5461 208 113 SNP 1 A 1 G 90.9 10 11 G 90.90909091 10 ConsensusfromContig5617 73 65 SNP 1 G 2 G/A 63.6/36.4 7/4 11 G 63.63636364 7 A 36.36363636 4 ConsensusfromContig5619 573 400 SNP 1 C 1 T 100 11 11 T 100 11 ConsensusfromContig5635 363 258 SNP 1 C 2 A/C 54.5/45.5 6/5 11 A 54.54545455 6 C 45.45454545 5 ConsensusfromContig5732 25 18 SNP 1 T 2 T/G 63.6/36.4 7/4 11 T 63.63636364 7 G 36.36363636 4 ConsensusfromContig5822 158 125 SNP 1 G 2 T/G 63.6/36.4 7/4 11 T 63.63636364 7 G 36.36363636 4 ConsensusfromContig5901 97 97 SNP 1 C 2 C/T 54.5/45.5 6/5 11 C 54.54545455 6 T 45.45454545 5 ConsensusfromContig5901 112 112 SNP 1 C 2 T/C 54.5/45.5 6/5 11 T 54.54545455 6 C 45.45454545 5 ConsensusfromContig5915 69 42 SNP 1 G 2 G/A 63.6/36.4 7/4 11 G 63.63636364 7 A 36.36363636 4 ConsensusfromContig5925 243 243 SNP 1 T 2 T/A 54.5/45.5 6/5 11 T 54.54545455 6 A 45.45454545 5 ConsensusfromContig5946 36 36 SNP 1 C 2 C/T 63.6/36.4 7/4 11 C 63.63636364 7 T 36.36363636 4 ConsensusfromContig5991 25 25 SNP 1 C 2 C/T 54.5/36.4 6/4 11 C 54.54545455 6 T 36.36363636 4 ConsensusfromContig6385 107 107 SNP 1 A 1 G 90.9 10 11 G 90.90909091 10 ConsensusfromContig6385 140 140 SNP 1 C 2 C/T 63.6/36.4 7/4 11 C 63.63636364 7 T 36.36363636 4 ConsensusfromContig6512 232 189 SNP 1 C 1 T 100 11 11 T 100 11 ConsensusfromContig6543 226 182 SNP 1 G 2 G/T 54.5/45.5 6/5 11 G 54.54545455 6 T 45.45454545 5 ConsensusfromContig6714 646 394 SNP 1 T 1 C 81.8 9 11 C 81.81818182 9 ConsensusfromContig6760 435 400 SNP 1 C 1 T 100 11 11 T 100 11 ConsensusfromContig6839 20 20 SNP 1 A 1 G 81.8 9 11 G 81.81818182 9 ConsensusfromContig6856 690 619 SNP 1 G 1 A 100 11 11 A 100 11 ConsensusfromContig6898 139 139 SNP 1 C 2 C/T 54.5/45.5 6/5 11 C 54.54545455 6 T 45.45454545 5 ConsensusfromContig7110 165 79 SNP 1 T 2 T/C 63.6/36.4 7/4 11 T 63.63636364 7 C 36.36363636 4 ConsensusfromContig7113 329 219 SNP 1 C 1 T 90.9 10 11 T 90.90909091 10 ConsensusfromContig7113 444 334 SNP 1 A 2 A/T 54.5/45.5 6/5 11 A 54.54545455 6 T 45.45454545 5 ConsensusfromContig7133 369 294 SNP 1 G 1 A 90.9 10 11 A 90.90909091 10 ConsensusfromContig7179 97 78 SNP 1 A 2 A/C 63.6/36.4 7/4 11 A 63.63636364 7 C 36.36363636 4 ConsensusfromContig7299 232 227 SNP 1 T 1 C 100 11 11 C 100 11 ConsensusfromContig7308 130 77 SNP 1 G 2 T/G 54.5/45.5 6/5 11 T 54.54545455 6 G 45.45454545 5 ConsensusfromContig7332 415 247 SNP 1 T 2 T/G 54.5/45.5 6/5 11 T 54.54545455 6 G 45.45454545 5 ConsensusfromContig7385 27 23 SNP 1 A 1 C 81.8 9 11 C 81.81818182 9 ConsensusfromContig7460 472 377 SNP 1 A 2 A/C 63.6/36.4 7/4 11 A 63.63636364 7 C 36.36363636 4 ConsensusfromContig7460 620 496 SNP 1 G 1 A 100 11 11 A 100 11 ConsensusfromContig7466 68 58 SNP 1 T 1 G 72.7 8 11 G 72.72727273 8 ConsensusfromContig7800 335 315 SNP 1 C 1 T 100 11 11 T 100 11 ConsensusfromContig8011 849 766 SNP 1 A 2 T/A 63.6/36.4 7/4 11 T 63.63636364 7 A 36.36363636 4 ConsensusfromContig8091 81 47 SNP 1 C 2 A/C 54.5/45.5 6/5 11 A 54.54545455 6 C 45.45454545 5 ConsensusfromContig8091 121 87 SNP 1 C 1 T 81.8 9 11 T 81.81818182 9 ConsensusfromContig8091 171 137 SNP 1 A 2 T/A 63.6/36.4 7/4 11 T 63.63636364 7 A 36.36363636 4 ConsensusfromContig8163 594 523 SNP 1 C 2 C/T 54.5/45.5 6/5 11 C 54.54545455 6 T 45.45454545 5 ConsensusfromContig8163 648 577 SNP 1 A 2 G/A 63.6/36.4 7/4 11 G 63.63636364 7 A 36.36363636 4 ConsensusfromContig8171 350 342 SNP 1 G 1 A 72.7 8 11 A 72.72727273 8 ConsensusfromContig8184 496 464 SNP 1 T 1 C 100 11 11 C 100 11 ConsensusfromContig8194 495 312 SNP 1 T 2 A/T 63.6/36.4 7/4 11 A 63.63636364 7 T 36.36363636 4 ConsensusfromContig8301 82 50 SNP 1 A 2 A/T 63.6/36.4 7/4 11 A 63.63636364 7 T 36.36363636 4 ConsensusfromContig8375 117 92 SNP 1 A 2 A/G 54.5/45.5 6/5 11 A 54.54545455 6 G 45.45454545 5 ConsensusfromContig8446 608 571 SNP 1 T 1 C 100 11 11 C 100 11 ConsensusfromContig8522 540 405 SNP 1 A 2 A/G 63.6/36.4 7/4 11 A 63.63636364 7 G 36.36363636 4 ConsensusfromContig8624 184 177 SNP 1 T 2 C/T 63.6/36.4 7/4 11 C 63.63636364 7 T 36.36363636 4 ConsensusfromContig8661 288 52 SNP 1 A 2 A/C 54.5/45.5 6/5 11 A 54.54545455 6 C 45.45454545 5 ConsensusfromContig8686 90 57 SNP 1 A 1 T 100 11 11 T 100 11 ConsensusfromContig8746 374 275 SNP 1 C 1 T 100 11 11 T 100 11 ConsensusfromContig8795 76 67 SNP 1 T 1 C 100 11 11 C 100 11 ConsensusfromContig8799 415 266 SNP 1 C 1 G 100 11 11 G 100 11 ConsensusfromContig8802 160 149 SNP 1 A 1 T 100 11 11 T 100 11 ConsensusfromContig9034 446 335 SNP 1 C 2 C/T 54.5/45.5 6/5 11 C 54.54545455 6 T 45.45454545 5 ConsensusfromContig9034 449 338 SNP 1 G 2 A/G 54.5/45.5 6/5 11 A 54.54545455 6 G 45.45454545 5 ConsensusfromContig9050 211 211 SNP 1 C 1 T 100 11 11 T 100 11 ConsensusfromContig9252 47 44 SNP 1 A 1 T 100 11 11 T 100 11 ConsensusfromContig9296 94 93 SNP 1 C 1 T 100 11 11 T 100 11 ConsensusfromContig9323 51 51 SNP 1 T 1 C 100 11 11 C 100 11 ConsensusfromContig9336 13 13 SNP 1 C 2 C/T 54.5/45.5 6/5 11 C 54.54545455 6 T 45.45454545 5 ConsensusfromContig124 68 68 SNP 1 G 2 G/A 58.3/41.7 7/5 12 G 58.33333333 7 A 41.66666667 5 ConsensusfromContig265 146 68 SNP 1 A 2 A/G 58.3/41.7 7/5 12 A 58.33333333 7 G 41.66666667 5 ConsensusfromContig407 67 67 SNP 1 C 1 T 91.7 11 12 T 91.66666667 11 ConsensusfromContig468 20 16 SNP 1 C 2 C/G 50.0/50.0 6/6 12 C 50 6 G 50 6 ConsensusfromContig616 262 218 SNP 1 T 1 C 100 12 12 C 100 12 ConsensusfromContig768 326 245 SNP 1 C 1 T 100 12 12 T 100 12 ConsensusfromContig777 99 92 SNP 1 G 1 A 100 12 12 A 100 12 ConsensusfromContig781 145 117 SNP 1 G 1 A 75 9 12 A 75 9 ConsensusfromContig853 40 18 SNP 1 C 1 G 75 9 12 G 75 9 ConsensusfromContig869 77 76 SNP 1 C 1 T 100 12 12 T 100 12 ConsensusfromContig939 128 86 SNP 1 C 1 T 91.7 11 12 T 91.66666667 11 ConsensusfromContig1082 219 168 SNP 1 C 2 G/C 58.3/41.7 7/5 12 G 58.33333333 7 C 41.66666667 5 ConsensusfromContig1208 647 582 SNP 1 A 2 A/G 58.3/41.7 7/5 12 A 58.33333333 7 G 41.66666667 5 ConsensusfromContig1215 97 90 SNP 1 A 1 T 75 9 12 T 75 9 ConsensusfromContig1296 12 6 SNP 1 T 1 G 100 12 12 G 100 12 ConsensusfromContig1417 648 338 SNP 1 C 1 T 100 12 12 T 100 12 ConsensusfromContig1432 246 230 SNP 1 A 1 C 100 12 12 C 100 12 ConsensusfromContig1458 116 38 SNP 1 T 1 A 75 9 12 A 75 9 ConsensusfromContig1557 262 146 SNP 1 T 2 G/T 50.0/50.0 6/6 12 G 50 6 T 50 6 ConsensusfromContig1591 222 170 SNP 1 A 2 A/G 50.0/50.0 6/6 12 A 50 6 G 50 6 ConsensusfromContig1623 86 86 SNP 1 T 1 C 91.7 11 12 C 91.66666667 11 ConsensusfromContig1670 497 430 SNP 1 A 2 G/A 58.3/41.7 7/5 12 G 58.33333333 7 A 41.66666667 5 ConsensusfromContig1734 126 115 SNP 1 C 1 T 83.3 10 12 T 83.33333333 10 ConsensusfromContig1793 210 192 SNP 1 T 2 T/G 58.3/41.7 7/5 12 T 58.33333333 7 G 41.66666667 5 ConsensusfromContig1852 624 464 SNP 1 T 2 T/A 58.3/41.7 7/5 12 T 58.33333333 7 A 41.66666667 5 ConsensusfromContig1873 328 260 SNP 1 A 1 T 100 12 12 T 100 12 ConsensusfromContig2100 86 54 SNP 1 C 1 T 100 12 12 T 100 12 ConsensusfromContig2117 508 426 SNP 1 T 1 C 83.3 10 12 C 83.33333333 10 ConsensusfromContig2131 419 358 SNP 1 G 2 G/T 50.0/50.0 6/6 12 G 50 6 T 50 6 ConsensusfromContig2177 410 388 SNP 1 C 1 G 100 12 12 G 100 12 ConsensusfromContig2436 388 307 SNP 1 A 1 T 91.7 11 12 T 91.66666667 11 ConsensusfromContig2482 259 228 SNP 1 G 2 G/C 58.3/41.7 7/5 12 G 58.33333333 7 C 41.66666667 5 ConsensusfromContig2570 399 389 SNP 1 T 2 C/T 50.0/50.0 6/6 12 C 50 6 T 50 6 ConsensusfromContig2668 78 32 SNP 1 A 1 G 100 12 12 G 100 12 ConsensusfromContig2759 85 62 SNP 1 A 2 G/A 58.3/41.7 7/5 12 G 58.33333333 7 A 41.66666667 5 ConsensusfromContig3152 271 223 SNP 1 G 1 A 100 12 12 A 100 12 ConsensusfromContig3166 319 299 SNP 1 A 1 G 75 9 12 G 75 9 ConsensusfromContig3202 138 79 SNP 1 C 1 T 66.7 8 12 T 66.66666667 8 ConsensusfromContig3203 87 79 SNP 1 T 2 T/C 58.3/41.7 7/5 12 T 58.33333333 7 C 41.66666667 5 ConsensusfromContig3291 349 305 SNP 1 T 2 T/G 58.3/41.7 7/5 12 T 58.33333333 7 G 41.66666667 5 ConsensusfromContig3313 978 518 SNP 1 C 1 A 91.7 11 12 A 91.66666667 11 ConsensusfromContig3377 427 390 SNP 1 C 1 T 66.7 8 12 T 66.66666667 8 ConsensusfromContig3651 341 309 SNP 1 C 1 T 100 12 12 T 100 12 ConsensusfromContig3801 111 60 SNP 1 G 1 A 100 12 12 A 100 12 ConsensusfromContig3809 241 196 SNP 1 C 1 T 66.7 8 12 T 66.66666667 8 ConsensusfromContig3810 221 198 SNP 1 T 2 G/T 50.0/50.0 6/6 12 G 50 6 T 50 6 ConsensusfromContig3858 144 33 SNP 1 T 2 A/T 50.0/50.0 6/6 12 A 50 6 T 50 6 ConsensusfromContig3865 446 418 SNP 1 G 1 A 100 12 12 A 100 12 ConsensusfromContig3928 355 347 SNP 1 A 1 G 100 12 12 G 100 12 ConsensusfromContig4027 128 100 SNP 1 C 1 T 100 12 12 T 100 12 ConsensusfromContig4433 104 76 SNP 1 A 1 G 66.7 8 12 G 66.66666667 8 ConsensusfromContig4510 76 68 SNP 1 G 1 A 83.3 10 12 A 83.33333333 10 ConsensusfromContig4654 105 105 SNP 1 T 2 T/C 58.3/41.7 7/5 12 T 58.33333333 7 C 41.66666667 5 ConsensusfromContig4654 141 141 SNP 1 T 1 C 83.3 10 12 C 83.33333333 10 ConsensusfromContig4682 286 248 SNP 1 T 2 C/T 58.3/41.7 7/5 12 C 58.33333333 7 T 41.66666667 5 ConsensusfromContig4726 15 10 SNP 1 T 1 C 100 12 12 C 100 12 ConsensusfromContig4765 285 233 SNP 1 C 2 C/T 50.0/50.0 6/6 12 C 50 6 T 50 6 ConsensusfromContig4765 306 254 SNP 1 T 2 T/G 58.3/41.7 7/5 12 T 58.33333333 7 G 41.66666667 5 ConsensusfromContig4908 78 78 SNP 1 C 1 T 66.7 8 12 T 66.66666667 8 ConsensusfromContig4937 112 100 SNP 1 C 2 T/C 58.3/41.7 7/5 12 T 58.33333333 7 C 41.66666667 5 ConsensusfromContig5044 52 25 SNP 1 G 2 A/G 58.3/41.7 7/5 12 A 58.33333333 7 G 41.66666667 5 ConsensusfromContig5091 49 19 SNP 1 C 1 T 91.7 11 12 T 91.66666667 11 ConsensusfromContig5113 779 647 SNP 1 A 1 T 66.7 8 12 T 66.66666667 8 ConsensusfromContig5140 23 23 SNP 1 T 2 C/T 58.3/41.7 7/5 12 C 58.33333333 7 T 41.66666667 5 ConsensusfromContig5202 244 243 SNP 1 C 1 T 100 12 12 T 100 12 ConsensusfromContig5254 151 136 SNP 1 T 2 T/C 58.3/41.7 7/5 12 T 58.33333333 7 C 41.66666667 5 ConsensusfromContig5294 739 637 SNP 1 T 1 A 66.7 8 12 A 66.66666667 8 ConsensusfromContig5311 206 201 SNP 1 T 2 T/A 58.3/41.7 7/5 12 T 58.33333333 7 A 41.66666667 5 ConsensusfromContig5316 386 264 SNP 1 T 1 C 100 12 12 C 100 12 ConsensusfromContig5601 277 221 SNP 1 C 1 A 100 12 12 A 100 12 ConsensusfromContig5874 424 320 SNP 1 A 2 A/T 50.0/50.0 6/6 12 A 50 6 T 50 6 ConsensusfromContig5880 280 213 SNP 1 T 2 A/T 58.3/41.7 7/5 12 A 58.33333333 7 T 41.66666667 5 ConsensusfromContig5943 70 70 SNP 1 C 1 T 100 12 12 T 100 12 ConsensusfromContig6011 337 309 SNP 1 G 1 A 100 12 12 A 100 12 ConsensusfromContig6059 278 154 SNP 1 C 2 C/G 58.3/41.7 7/5 12 C 58.33333333 7 G 41.66666667 5 ConsensusfromContig6116 163 153 SNP 1 C 1 T 100 12 12 T 100 12 ConsensusfromContig6214 262 253 SNP 1 T 2 T/C 58.3/41.7 7/5 12 T 58.33333333 7 C 41.66666667 5 ConsensusfromContig6325 72 44 SNP 1 A 2 A/C 50.0/50.0 6/6 12 A 50 6 C 50 6 ConsensusfromContig6337 77 70 SNP 1 T 2 T/G 58.3/41.7 7/5 12 T 58.33333333 7 G 41.66666667 5 ConsensusfromContig6360 56 24 SNP 1 A 1 T 100 12 12 T 100 12 ConsensusfromContig6635 54 34 SNP 1 G 2 A/G 50.0/50.0 6/6 12 A 50 6 G 50 6 ConsensusfromContig6680 77 74 SNP 1 A 1 G 100 12 12 G 100 12 ConsensusfromContig6704 58 35 SNP 1 T 1 C 75 9 12 C 75 9 ConsensusfromContig6818 165 108 SNP 1 T 2 T/C 58.3/41.7 7/5 12 T 58.33333333 7 C 41.66666667 5 ConsensusfromContig6842 336 328 SNP 1 C 2 A/C 50.0/50.0 6/6 12 A 50 6 C 50 6 ConsensusfromContig7077 253 171 SNP 1 C 1 T 100 12 12 T 100 12 ConsensusfromContig7096 238 145 SNP 1 A 2 A/T 50.0/50.0 6/6 12 A 50 6 T 50 6 ConsensusfromContig7145 161 161 SNP 1 G 2 T/G 58.3/41.7 7/5 12 T 58.33333333 7 G 41.66666667 5 ConsensusfromContig7370 163 163 SNP 1 C 2 G/C 58.3/41.7 7/5 12 G 58.33333333 7 C 41.66666667 5 ConsensusfromContig7411 249 249 SNP 1 G 2 A/G 58.3/41.7 7/5 12 A 58.33333333 7 G 41.66666667 5 ConsensusfromContig7452 215 200 SNP 1 A 1 G 100 12 12 G 100 12 ConsensusfromContig7514 35 35 SNP 1 A 2 A/G 50.0/50.0 6/6 12 A 50 6 G 50 6 ConsensusfromContig7604 303 275 SNP 1 T 2 G/T 58.3/41.7 7/5 12 G 58.33333333 7 T 41.66666667 5 ConsensusfromContig7628 63 63 SNP 1 A 2 A/C 58.3/41.7 7/5 12 A 58.33333333 7 C 41.66666667 5 ConsensusfromContig7757 275 248 SNP 1 A 1 G 100 12 12 G 100 12 ConsensusfromContig7989 218 177 SNP 1 A 2 A/T 58.3/41.7 7/5 12 A 58.33333333 7 T 41.66666667 5 ConsensusfromContig8070 294 264 SNP 1 G 1 T 83.3 10 12 T 83.33333333 10 ConsensusfromContig8075 477 345 SNP 1 A 1 C 91.7 11 12 C 91.66666667 11 ConsensusfromContig8083 98 73 SNP 1 C 1 T 100 12 12 T 100 12 ConsensusfromContig8091 73 39 SNP 1 C 2 T/C 58.3/41.7 7/5 12 T 58.33333333 7 C 41.66666667 5 ConsensusfromContig8139 437 420 SNP 1 T 1 C 100 12 12 C 100 12 ConsensusfromContig8163 563 492 SNP 1 A 2 A/G 50.0/50.0 6/6 12 A 50 6 G 50 6 ConsensusfromContig8441 317 231 SNP 1 T 1 A 75 9 12 A 75 9 ConsensusfromContig8700 153 120 SNP 1 C 2 C/G 50.0/50.0 6/6 12 C 50 6 G 50 6 ConsensusfromContig8748 288 280 SNP 1 G 1 A 75 9 12 A 75 9 ConsensusfromContig8799 416 267 SNP 1 G 1 C 91.7 11 12 C 91.66666667 11 ConsensusfromContig9042 571 115 SNP 1 C 2 T/C 58.3/41.7 7/5 12 T 58.33333333 7 C 41.66666667 5 ConsensusfromContig36 355 316 SNP 1 C 2 C/T 61.5/38.5 8/5 13 C 61.53846154 8 T 38.46153846 5 ConsensusfromContig279 90 87 SNP 1 C 1 T 100 13 13 T 100 13 ConsensusfromContig296 277 265 SNP 1 A 1 G 100 13 13 G 100 13 ConsensusfromContig336 228 170 SNP 1 A 2 A/T 53.8/46.2 7/6 13 A 53.84615385 7 T 46.15384615 6 ConsensusfromContig337 345 294 SNP 1 C 2 C/T 53.8/46.2 7/6 13 C 53.84615385 7 T 46.15384615 6 ConsensusfromContig380 274 164 SNP 1 G 1 A 76.9 10 13 A 76.92307692 10 ConsensusfromContig773 324 293 SNP 1 T 2 T/A 53.8/46.2 7/6 13 T 53.84615385 7 A 46.15384615 6 ConsensusfromContig820 328 317 SNP 1 C 2 C/T 53.8/46.2 7/6 13 C 53.84615385 7 T 46.15384615 6 ConsensusfromContig907 177 120 SNP 1 A 1 C 84.6 11 13 C 84.61538462 11 ConsensusfromContig1137 413 307 SNP 1 G 1 T 92.3 12 13 T 92.30769231 12 ConsensusfromContig1335 548 510 SNP 1 A 2 A/T 53.8/46.2 7/6 13 A 53.84615385 7 T 46.15384615 6 ConsensusfromContig1521 170 170 SNP 1 A 2 A/G 61.5/38.5 8/5 13 A 61.53846154 8 G 38.46153846 5 ConsensusfromContig1665 295 276 SNP 1 T 2 T/C 53.8/46.2 7/6 13 T 53.84615385 7 C 46.15384615 6 ConsensusfromContig1670 470 403 SNP 1 T 2 A/T 53.8/46.2 7/6 13 A 53.84615385 7 T 46.15384615 6 ConsensusfromContig1752 99 90 SNP 1 A 2 A/G 61.5/38.5 8/5 13 A 61.53846154 8 G 38.46153846 5 ConsensusfromContig1976 330 255 SNP 1 T 2 T/C 53.8/46.2 7/6 13 T 53.84615385 7 C 46.15384615 6 ConsensusfromContig1976 417 342 SNP 1 T 1 C 76.9 10 13 C 76.92307692 10 ConsensusfromContig2006 782 708 SNP 1 T 1 C 100 13 13 C 100 13 ConsensusfromContig2021 567 532 SNP 1 G 2 G/A 61.5/38.5 8/5 13 G 61.53846154 8 A 38.46153846 5 ConsensusfromContig2177 442 420 SNP 1 A 1 C 92.3 12 13 C 92.30769231 12 ConsensusfromContig2212 53 39 SNP 1 T 1 C 100 13 13 C 100 13 ConsensusfromContig2436 391 310 SNP 1 G 1 A 76.9 10 13 A 76.92307692 10 ConsensusfromContig2504 32 24 SNP 1 G 2 A/G 53.8/46.2 7/6 13 A 53.84615385 7 G 46.15384615 6 ConsensusfromContig2562 634 530 SNP 1 A 1 C 100 13 13 C 100 13 ConsensusfromContig2566 51 51 SNP 1 C 2 T/C 53.8/46.2 7/6 13 T 53.84615385 7 C 46.15384615 6 ConsensusfromContig2641 959 778 SNP 1 T 1 C 76.9 10 13 C 76.92307692 10 ConsensusfromContig2653 240 182 SNP 1 C 1 T 100 13 13 T 100 13 ConsensusfromContig2696 458 425 SNP 1 G 2 T/G 61.5/38.5 8/5 13 T 61.53846154 8 G 38.46153846 5 ConsensusfromContig2759 154 131 SNP 1 T 2 C/T 61.5/38.5 8/5 13 C 61.53846154 8 T 38.46153846 5 ConsensusfromContig2796 72 47 SNP 1 C 2 C/T 61.5/38.5 8/5 13 C 61.53846154 8 T 38.46153846 5 ConsensusfromContig2872 136 119 SNP 1 C 1 A 84.6 11 13 A 84.61538462 11 ConsensusfromContig3007 187 157 SNP 1 C 2 G/C 61.5/38.5 8/5 13 G 61.53846154 8 C 38.46153846 5 ConsensusfromContig3153 96 94 SNP 1 A 1 T 61.5 8 13 T 61.53846154 8 ConsensusfromContig3158 183 183 SNP 1 G 1 A 69.2 9 13 A 69.23076923 9 ConsensusfromContig3236 124 121 SNP 1 C 1 T 84.6 11 13 T 84.61538462 11 ConsensusfromContig3255 128 108 SNP 1 A 1 C 100 13 13 C 100 13 ConsensusfromContig3258 245 128 SNP 1 T 1 G 100 13 13 G 100 13 ConsensusfromContig3512 210 168 SNP 1 T 2 T/C 61.5/38.5 8/5 13 T 61.53846154 8 C 38.46153846 5 ConsensusfromContig3530 342 224 SNP 1 G 1 A 100 13 13 A 100 13 ConsensusfromContig3758 128 117 SNP 1 A 2 G/A 61.5/38.5 8/5 13 G 61.53846154 8 A 38.46153846 5 ConsensusfromContig3809 226 181 SNP 1 A 1 C 69.2 9 13 C 69.23076923 9 ConsensusfromContig3942 193 150 SNP 1 T 1 C 69.2 9 13 C 69.23076923 9 ConsensusfromContig4228 374 311 SNP 1 A 2 A/G 53.8/46.2 7/6 13 A 53.84615385 7 G 46.15384615 6 ConsensusfromContig4232 169 158 SNP 1 A 1 G 100 13 13 G 100 13 ConsensusfromContig4655 1001 724 SNP 1 A 2 A/G 61.5/38.5 8/5 13 A 61.53846154 8 G 38.46153846 5 ConsensusfromContig5044 53 26 SNP 1 T 2 T/A 53.8/46.2 7/6 13 T 53.84615385 7 A 46.15384615 6 ConsensusfromContig5057 202 202 SNP 1 G 2 G/T 53.8/46.2 7/6 13 G 53.84615385 7 T 46.15384615 6 ConsensusfromContig5104 51 43 SNP 1 C 1 G 84.6 11 13 G 84.61538462 11 ConsensusfromContig5254 178 163 SNP 1 T 2 C/T 53.8/46.2 7/6 13 C 53.84615385 7 T 46.15384615 6 ConsensusfromContig5631 217 178 SNP 1 C 2 A/C 53.8/46.2 7/6 13 A 53.84615385 7 C 46.15384615 6 ConsensusfromContig5734 471 455 SNP 1 A 1 G 92.3 12 13 G 92.30769231 12 ConsensusfromContig5744 117 73 SNP 1 T 2 C/T 61.5/38.5 8/5 13 C 61.53846154 8 T 38.46153846 5 ConsensusfromContig5828 346 233 SNP 1 T 2 T/A 53.8/46.2 7/6 13 T 53.84615385 7 A 46.15384615 6 ConsensusfromContig6155 208 119 SNP 1 C 1 T 100 13 13 T 100 13 ConsensusfromContig6210 63 47 SNP 1 T 2 T/C 53.8/46.2 7/6 13 T 53.84615385 7 C 46.15384615 6 ConsensusfromContig6214 20 11 SNP 1 A 2 G/A 61.5/38.5 8/5 13 G 61.53846154 8 A 38.46153846 5 ConsensusfromContig6214 25 16 SNP 1 T 2 A/T 61.5/38.5 8/5 13 A 61.53846154 8 T 38.46153846 5 ConsensusfromContig6237 250 55 SNP 1 T 1 C 100 13 13 C 100 13 ConsensusfromContig6237 261 66 SNP 1 A 1 G 100 13 13 G 100 13 ConsensusfromContig6283 255 224 SNP 1 C 1 T 100 13 13 T 100 13 ConsensusfromContig6329 213 158 SNP 1 T 1 C 100 13 13 C 100 13 ConsensusfromContig6329 249 194 SNP 1 A 1 C 84.6 11 13 C 84.61538462 11 ConsensusfromContig6339 74 43 SNP 1 A 1 G 100 13 13 G 100 13 ConsensusfromContig6339 109 78 SNP 1 A 1 G 100 13 13 G 100 13 ConsensusfromContig6382 83 70 SNP 1 G 1 A 84.6 11 13 A 84.61538462 11 ConsensusfromContig6546 338 297 SNP 1 G 2 G/T 61.5/38.5 8/5 13 G 61.53846154 8 T 38.46153846 5 ConsensusfromContig6680 46 43 SNP 1 T 2 T/C 46.2/38.5 6/5 13 T 46.15384615 6 C 38.46153846 5 ConsensusfromContig6688 200 200 SNP 1 A 1 G 100 13 13 G 100 13 ConsensusfromContig7100 160 127 SNP 1 C 1 T 100 13 13 T 100 13 ConsensusfromContig7145 242 239 SNP 1 C 1 T 69.2 9 13 T 69.23076923 9 ConsensusfromContig7185 280 210 SNP 1 A 1 G 100 13 13 G 100 13 ConsensusfromContig7226 197 144 SNP 1 G 2 G/T 53.8/46.2 7/6 13 G 53.84615385 7 T 46.15384615 6 ConsensusfromContig7322 330 310 SNP 1 A 1 C 100 13 13 C 100 13 ConsensusfromContig7325 420 313 SNP 1 T 1 C 92.3 12 13 C 92.30769231 12 ConsensusfromContig7376 142 126 SNP 1 G 2 T/G 53.8/46.2 7/6 13 T 53.84615385 7 G 46.15384615 6 ConsensusfromContig7508 115 111 SNP 1 G 1 T 100 13 13 T 100 13 ConsensusfromContig7716 128 128 SNP 1 G 1 A 84.6 11 13 A 84.61538462 11 ConsensusfromContig7854 643 442 SNP 1 G 2 C/G 46.2/46.2 6/6 13 C 46.15384615 6 G 46.15384615 6 ConsensusfromContig7932 40 23 SNP 1 A 2 A/T 53.8/46.2 7/6 13 A 53.84615385 7 T 46.15384615 6 ConsensusfromContig7932 264 247 SNP 1 T 2 T/C 53.8/46.2 7/6 13 T 53.84615385 7 C 46.15384615 6 ConsensusfromContig7968 372 357 SNP 1 C 1 T 100 13 13 T 100 13 ConsensusfromContig8008 147 147 SNP 1 C 2 C/T 61.5/38.5 8/5 13 C 61.53846154 8 T 38.46153846 5 ConsensusfromContig8011 944 858 SNP 1 A 2 G/A 53.8/46.2 7/6 13 G 53.84615385 7 A 46.15384615 6 ConsensusfromContig8091 113 79 SNP 1 A 1 G 100 13 13 G 100 13 ConsensusfromContig8216 286 234 SNP 1 T 2 T/C 61.5/38.5 8/5 13 T 61.53846154 8 C 38.46153846 5 ConsensusfromContig8403 457 359 SNP 1 T 2 C/T 61.5/38.5 8/5 13 C 61.53846154 8 T 38.46153846 5 ConsensusfromContig8554 110 54 SNP 1 A 2 A/T 61.5/38.5 8/5 13 A 61.53846154 8 T 38.46153846 5 ConsensusfromContig8639 441 407 SNP 1 T 2 T/C 53.8/46.2 7/6 13 T 53.84615385 7 C 46.15384615 6 ConsensusfromContig8648 155 92 SNP 1 A 2 A/C 61.5/38.5 8/5 13 A 61.53846154 8 C 38.46153846 5 ConsensusfromContig8887 216 212 SNP 1 C 1 T 100 13 13 T 100 13 ConsensusfromContig8890 217 215 SNP 1 C 2 C/G 61.5/38.5 8/5 13 C 61.53846154 8 G 38.46153846 5 ConsensusfromContig8890 222 220 SNP 1 T 2 T/C 61.5/38.5 8/5 13 T 61.53846154 8 C 38.46153846 5 ConsensusfromContig8937 39 37 SNP 1 A 1 G 100 13 13 G 100 13 ConsensusfromContig8946 219 203 SNP 1 A 1 G 84.6 11 13 G 84.61538462 11 ConsensusfromContig8969 488 488 SNP 1 G 2 G/A 53.8/46.2 7/6 13 G 53.84615385 7 A 46.15384615 6 ConsensusfromContig8970 262 223 SNP 1 C 2 C/T 61.5/38.5 8/5 13 C 61.53846154 8 T 38.46153846 5 ConsensusfromContig8990 116 100 SNP 1 A 1 G 100 13 13 G 100 13 ConsensusfromContig8990 356 327 SNP 1 G 1 A 53.8 7 13 A 53.84615385 7 ConsensusfromContig9172 592 540 SNP 1 G 1 A 100 13 13 A 100 13 ConsensusfromContig9216 590 321 SNP 1 C 1 T 100 13 13 T 100 13 ConsensusfromContig9360 141 112 SNP 1 G 2 G/A 61.5/38.5 8/5 13 G 61.53846154 8 A 38.46153846 5 ConsensusfromContig16 126 108 SNP 1 C 2 C/T 57.1/42.9 8/6 14 C 57.14285714 8 T 42.85714286 6 ConsensusfromContig452 315 285 SNP 1 T 1 C 71.4 10 14 C 71.42857143 10 ConsensusfromContig452 325 295 SNP 1 T 1 C 71.4 10 14 C 71.42857143 10 ConsensusfromContig468 69 65 SNP 1 C 2 C/T 50.0/50.0 7/7 14 C 50 7 T 50 7 ConsensusfromContig776 242 239 SNP 1 A 1 G 100 14 14 G 100 14 ConsensusfromContig828 144 141 SNP 1 C 1 T 100 14 14 T 100 14 ConsensusfromContig963 29 12 SNP 1 G 1 C 85.7 12 14 C 85.71428571 12 ConsensusfromContig1118 257 234 SNP 1 C 1 T 71.4 10 14 T 71.42857143 10 ConsensusfromContig1163 266 124 SNP 1 G 1 T 100 14 14 T 100 14 ConsensusfromContig1301 116 115 SNP 1 C 2 C/T 50.0/50.0 7/7 14 C 50 7 T 50 7 ConsensusfromContig1529 217 183 SNP 1 G 2 G/T 64.3/35.7 9/5 14 G 64.28571429 9 T 35.71428571 5 ConsensusfromContig1660 365 109 SNP 1 T 1 C 85.7 12 14 C 85.71428571 12 ConsensusfromContig1759 112 81 SNP 1 C 2 A/C 50.0/50.0 7/7 14 A 50 7 C 50 7 ConsensusfromContig1852 565 405 SNP 1 A 2 G/A 64.3/35.7 9/5 14 G 64.28571429 9 A 35.71428571 5 ConsensusfromContig1954 332 239 SNP 1 A 2 T/A 64.3/35.7 9/5 14 T 64.28571429 9 A 35.71428571 5 ConsensusfromContig1982 321 128 SNP 1 G 1 T 92.9 13 14 T 92.85714286 13 ConsensusfromContig2021 566 531 SNP 1 G 2 A/G 50.0/50.0 7/7 14 A 50 7 G 50 7 ConsensusfromContig2211 176 159 SNP 1 G 1 A 100 14 14 A 100 14 ConsensusfromContig2212 420 358 SNP 1 A 1 G 100 14 14 G 100 14 ConsensusfromContig2508 73 67 SNP 1 G 2 G/A 64.3/35.7 9/5 14 G 64.28571429 9 A 35.71428571 5 ConsensusfromContig2508 281 275 SNP 1 G 2 G/A 57.1/42.9 8/6 14 G 57.14285714 8 A 42.85714286 6 ConsensusfromContig2641 723 542 SNP 1 T 2 A/T 57.1/42.9 8/6 14 A 57.14285714 8 T 42.85714286 6 ConsensusfromContig2684 60 54 SNP 1 T 2 T/C 57.1/42.9 8/6 14 T 57.14285714 8 C 42.85714286 6 ConsensusfromContig2687 112 76 SNP 1 T 2 C/T 50.0/50.0 7/7 14 C 50 7 T 50 7 ConsensusfromContig2696 470 437 SNP 1 T 2 C/T 64.3/35.7 9/5 14 C 64.28571429 9 T 35.71428571 5 ConsensusfromContig2736 123 82 SNP 1 C 2 C/G 64.3/35.7 9/5 14 C 64.28571429 9 G 35.71428571 5 ConsensusfromContig2798 96 44 SNP 1 C 2 T/C 64.3/35.7 9/5 14 T 64.28571429 9 C 35.71428571 5 ConsensusfromContig3010 170 166 SNP 1 A 2 A/G 64.3/35.7 9/5 14 A 64.28571429 9 G 35.71428571 5 ConsensusfromContig3039 210 200 SNP 1 T 2 C/T 64.3/35.7 9/5 14 C 64.28571429 9 T 35.71428571 5 ConsensusfromContig3085 300 248 SNP 1 A 1 G 100 14 14 G 100 14 ConsensusfromContig3228 286 286 SNP 1 C 1 T 100 14 14 T 100 14 ConsensusfromContig3238 56 35 SNP 1 A 1 G 78.6 11 14 G 78.57142857 11 ConsensusfromContig3340 290 290 SNP 1 T 2 T/C 64.3/35.7 9/5 14 T 64.28571429 9 C 35.71428571 5 ConsensusfromContig3409 384 256 SNP 1 A 2 A/G 57.1/42.9 8/6 14 A 57.14285714 8 G 42.85714286 6 ConsensusfromContig3422 160 141 SNP 1 A 2 A/G 57.1/42.9 8/6 14 A 57.14285714 8 G 42.85714286 6 ConsensusfromContig3440 582 578 SNP 1 G 1 A 100 14 14 A 100 14 ConsensusfromContig3540 190 147 SNP 1 C 1 T 100 14 14 T 100 14 ConsensusfromContig3648 158 149 SNP 1 C 2 C/T 50.0/50.0 7/7 14 C 50 7 T 50 7 ConsensusfromContig3744 422 388 SNP 1 A 1 G 100 14 14 G 100 14 ConsensusfromContig3985 246 220 SNP 1 T 2 A/T 50.0/50.0 7/7 14 A 50 7 T 50 7 ConsensusfromContig4019 19 19 SNP 1 G 2 G/T 57.1/42.9 8/6 14 G 57.14285714 8 T 42.85714286 6 ConsensusfromContig4049 349 182 SNP 1 A 2 A/G 57.1/42.9 8/6 14 A 57.14285714 8 G 42.85714286 6 ConsensusfromContig4058 136 92 SNP 1 C 1 T 100 14 14 T 100 14 ConsensusfromContig4150 114 100 SNP 1 G 2 A/G 57.1/42.9 8/6 14 A 57.14285714 8 G 42.85714286 6 ConsensusfromContig4229 286 220 SNP 1 A 2 A/G 64.3/35.7 9/5 14 A 64.28571429 9 G 35.71428571 5 ConsensusfromContig4260 264 144 SNP 1 A 1 T 100 14 14 T 100 14 ConsensusfromContig4297 14 5 SNP 1 A 2 A/G 64.3/35.7 9/5 14 A 64.28571429 9 G 35.71428571 5 ConsensusfromContig4415 197 160 SNP 1 C 2 C/G 50.0/42.9 7/6 14 C 50 7 G 42.85714286 6 ConsensusfromContig4421 107 87 SNP 1 A 1 C 100 14 14 C 100 14 ConsensusfromContig4552 552 451 SNP 1 C 2 C/T 64.3/35.7 9/5 14 C 64.28571429 9 T 35.71428571 5 ConsensusfromContig4561 282 169 SNP 1 T 2 G/T 64.3/35.7 9/5 14 G 64.28571429 9 T 35.71428571 5 ConsensusfromContig4575 111 60 SNP 1 G 2 G/C 64.3/35.7 9/5 14 G 64.28571429 9 C 35.71428571 5 ConsensusfromContig4593 302 195 SNP 1 A 1 G 100 14 14 G 100 14 ConsensusfromContig4640 179 166 SNP 1 C 2 C/T 50.0/50.0 7/7 14 C 50 7 T 50 7 ConsensusfromContig4830 177 117 SNP 1 A 1 G 100 14 14 G 100 14 ConsensusfromContig5263 462 439 SNP 1 A 1 T 100 14 14 T 100 14 ConsensusfromContig5274 269 242 SNP 1 C 1 G 78.6 11 14 G 78.57142857 11 ConsensusfromContig5644 274 191 SNP 1 A 2 A/C 50.0/50.0 7/7 14 A 50 7 C 50 7 ConsensusfromContig5729 238 232 SNP 1 G 2 G/T 64.3/35.7 9/5 14 G 64.28571429 9 T 35.71428571 5 ConsensusfromContig5758 200 199 SNP 1 C 2 T/C 64.3/35.7 9/5 14 T 64.28571429 9 C 35.71428571 5 ConsensusfromContig5830 43 33 SNP 1 C 2 C/T 64.3/35.7 9/5 14 C 64.28571429 9 T 35.71428571 5 ConsensusfromContig5874 286 182 SNP 1 A 1 G 100 14 14 G 100 14 ConsensusfromContig5874 409 305 SNP 1 G 1 A 78.6 11 14 A 78.57142857 11 ConsensusfromContig6155 315 226 SNP 1 C 1 T 100 14 14 T 100 14 ConsensusfromContig6176 112 110 SNP 1 A 1 G 78.6 11 14 G 78.57142857 11 ConsensusfromContig6195 193 10 SNP 1 C 1 T 92.9 13 14 T 92.85714286 13 ConsensusfromContig6242 20 20 SNP 1 A 1 G 92.9 13 14 G 92.85714286 13 ConsensusfromContig6363 36 21 SNP 1 G 2 C/G 57.1/42.9 8/6 14 C 57.14285714 8 G 42.85714286 6 ConsensusfromContig6484 205 153 SNP 1 A 2 A/G 57.1/42.9 8/6 14 A 57.14285714 8 G 42.85714286 6 ConsensusfromContig6662 457 195 SNP 1 G 2 A/G 50.0/50.0 7/7 14 A 50 7 G 50 7 ConsensusfromContig6704 358 335 SNP 1 A 1 G 85.7 12 14 G 85.71428571 12 ConsensusfromContig6728 424 373 SNP 1 C 1 T 100 14 14 T 100 14 ConsensusfromContig6941 251 214 SNP 1 A 2 C/A 57.1/42.9 8/6 14 C 57.14285714 8 A 42.85714286 6 ConsensusfromContig7096 87 39 SNP 1 T 1 C 78.6 11 14 C 78.57142857 11 ConsensusfromContig7190 171 95 SNP 1 C 2 T/C 57.1/42.9 8/6 14 T 57.14285714 8 C 42.85714286 6 ConsensusfromContig7226 190 137 SNP 1 G 2 G/A 57.1/42.9 8/6 14 G 57.14285714 8 A 42.85714286 6 ConsensusfromContig7508 114 110 SNP 1 A 1 G 100 14 14 G 100 14 ConsensusfromContig7508 257 253 SNP 1 A 1 G 100 14 14 G 100 14 ConsensusfromContig7514 22 22 SNP 1 C 2 T/C 57.1/42.9 8/6 14 T 57.14285714 8 C 42.85714286 6 ConsensusfromContig7836 142 10 SNP 1 C 1 T 92.9 13 14 T 92.85714286 13 ConsensusfromContig7888 624 593 SNP 1 A 1 G 100 14 14 G 100 14 ConsensusfromContig7940 749 442 SNP 1 C 2 C/T 50.0/50.0 7/7 14 C 50 7 T 50 7 ConsensusfromContig7943 652 503 SNP 1 C 1 T 100 14 14 T 100 14 ConsensusfromContig8011 831 748 SNP 1 C 2 C/T 64.3/35.7 9/5 14 C 64.28571429 9 T 35.71428571 5 ConsensusfromContig8619 294 170 SNP 1 G 2 C/G 57.1/42.9 8/6 14 C 57.14285714 8 G 42.85714286 6 ConsensusfromContig8620 222 194 SNP 1 C 2 C/T 57.1/42.9 8/6 14 C 57.14285714 8 T 42.85714286 6 ConsensusfromContig8644 304 244 SNP 1 C 1 T 100 14 14 T 100 14 ConsensusfromContig8732 59 42 SNP 1 T 2 T/C 57.1/42.9 8/6 14 T 57.14285714 8 C 42.85714286 6 ConsensusfromContig8789 372 322 SNP 1 A 1 C 100 14 14 C 100 14 ConsensusfromContig87 196 191 SNP 1 A 1 T 73.3 11 15 T 73.33333333 11 ConsensusfromContig239 105 11 SNP 1 A 1 G 100 15 15 G 100 15 ConsensusfromContig350 164 164 SNP 1 C 2 T/C 53.3/46.7 8/7 15 T 53.33333333 8 C 46.66666667 7 ConsensusfromContig380 277 167 SNP 1 A 1 G 73.3 11 15 G 73.33333333 11 ConsensusfromContig434 375 320 SNP 1 C 2 T/C 60.0/40.0 9/6 15 T 60 9 C 40 6 ConsensusfromContig510 205 149 SNP 1 G 1 A 100 15 15 A 100 15 ConsensusfromContig538 269 208 SNP 1 T 1 G 100 15 15 G 100 15 ConsensusfromContig602 114 105 SNP 1 T 1 G 73.3 11 15 G 73.33333333 11 ConsensusfromContig779 103 22 SNP 1 T 1 C 93.3 14 15 C 93.33333333 14 ConsensusfromContig1097 277 257 SNP 1 A 1 T 100 15 15 T 100 15 ConsensusfromContig1492 133 81 SNP 1 G 1 A 80 12 15 A 80 12 ConsensusfromContig1660 372 116 SNP 1 G 1 C 100 15 15 C 100 15 ConsensusfromContig1670 89 71 SNP 1 A 1 C 86.7 13 15 C 86.66666667 13 ConsensusfromContig1863 35 27 SNP 1 G 2 G/T 60.0/40.0 9/6 15 G 60 9 T 40 6 ConsensusfromContig1948 277 267 SNP 1 T 1 C 100 15 15 C 100 15 ConsensusfromContig1960 61 53 SNP 1 G 1 A 66.7 10 15 A 66.66666667 10 ConsensusfromContig2031 169 165 SNP 1 T 1 A 100 15 15 A 100 15 ConsensusfromContig2046 340 302 SNP 1 C 1 T 100 15 15 T 100 15 ConsensusfromContig2117 149 102 SNP 1 C 2 T/C 53.3/46.7 8/7 15 T 53.33333333 8 C 46.66666667 7 ConsensusfromContig2852 195 145 SNP 1 C 1 T 100 15 15 T 100 15 ConsensusfromContig2857 231 175 SNP 1 T 1 C 73.3 11 15 C 73.33333333 11 ConsensusfromContig3039 267 257 SNP 1 G 2 G/A 60.0/40.0 9/6 15 G 60 9 A 40 6 ConsensusfromContig3042 318 306 SNP 1 A 1 G 100 15 15 G 100 15 ConsensusfromContig3158 30 30 SNP 1 A 1 G 100 15 15 G 100 15 ConsensusfromContig3191 404 370 SNP 1 A 1 G 66.7 10 15 G 66.66666667 10 ConsensusfromContig3196 200 192 SNP 1 C 2 C/G 60.0/40.0 9/6 15 C 60 9 G 40 6 ConsensusfromContig3758 124 113 SNP 1 T 2 A/T 53.3/46.7 8/7 15 A 53.33333333 8 T 46.66666667 7 ConsensusfromContig4066 466 415 SNP 1 C 1 T 100 15 15 T 100 15 ConsensusfromContig4228 345 282 SNP 1 A 2 G/A 53.3/46.7 8/7 15 G 53.33333333 8 A 46.66666667 7 ConsensusfromContig4444 74 54 SNP 1 C 1 T 100 15 15 T 100 15 ConsensusfromContig4447 141 114 SNP 1 G 1 C 73.3 11 15 C 73.33333333 11 ConsensusfromContig4447 148 121 SNP 1 C 1 T 100 15 15 T 100 15 ConsensusfromContig4739 519 403 SNP 1 T 2 T/C 60.0/40.0 9/6 15 T 60 9 C 40 6 ConsensusfromContig4741 725 490 SNP 1 T 1 A 86.7 13 15 A 86.66666667 13 ConsensusfromContig4828 290 253 SNP 1 C 1 T 100 15 15 T 100 15 ConsensusfromContig5636 341 341 SNP 1 G 2 C/G 53.3/46.7 8/7 15 C 53.33333333 8 G 46.66666667 7 ConsensusfromContig5762 623 579 SNP 1 G 1 T 100 15 15 T 100 15 ConsensusfromContig5829 300 296 SNP 1 G 2 T/G 53.3/46.7 8/7 15 T 53.33333333 8 G 46.66666667 7 ConsensusfromContig5946 215 215 SNP 1 G 1 A 100 15 15 A 100 15 ConsensusfromContig6000 378 345 SNP 1 G 2 A/G 53.3/46.7 8/7 15 A 53.33333333 8 G 46.66666667 7 ConsensusfromContig6100 444 171 SNP 1 A 1 G 80 12 15 G 80 12 ConsensusfromContig6116 168 158 SNP 1 C 1 T 100 15 15 T 100 15 ConsensusfromContig6331 653 449 SNP 1 T 2 T/C 60.0/40.0 9/6 15 T 60 9 C 40 6 ConsensusfromContig6339 145 114 SNP 1 C 2 C/G 60.0/40.0 9/6 15 C 60 9 G 40 6 ConsensusfromContig6363 38 23 SNP 1 G 2 T/G 53.3/46.7 8/7 15 T 53.33333333 8 G 46.66666667 7 ConsensusfromContig6395 274 257 SNP 1 G 2 G/A 53.3/46.7 8/7 15 G 53.33333333 8 A 46.66666667 7 ConsensusfromContig6546 236 195 SNP 1 A 2 G/A 53.3/46.7 8/7 15 G 53.33333333 8 A 46.66666667 7 ConsensusfromContig6662 475 213 SNP 1 A 2 A/C 53.3/46.7 8/7 15 A 53.33333333 8 C 46.66666667 7 ConsensusfromContig6804 402 370 SNP 1 A 1 G 100 15 15 G 100 15 ConsensusfromContig6842 99 91 SNP 1 A 2 A/C 60.0/40.0 9/6 15 A 60 9 C 40 6 ConsensusfromContig6898 111 111 SNP 1 C 2 A/C 60.0/40.0 9/6 15 A 60 9 C 40 6 ConsensusfromContig6898 114 114 SNP 1 C 1 T 100 15 15 T 100 15 ConsensusfromContig6922 182 48 SNP 1 G 2 G/A 60.0/40.0 9/6 15 G 60 9 A 40 6 ConsensusfromContig7096 268 175 SNP 1 A 2 C/A 60.0/40.0 9/6 15 C 60 9 A 40 6 ConsensusfromContig7132 550 275 SNP 1 G 2 A/G 53.3/46.7 8/7 15 A 53.33333333 8 G 46.66666667 7 ConsensusfromContig7259 149 93 SNP 1 C 1 T 93.3 14 15 T 93.33333333 14 ConsensusfromContig7278 58 27 SNP 1 G 2 G/T 53.3/46.7 8/7 15 G 53.33333333 8 T 46.66666667 7 ConsensusfromContig7415 145 112 SNP 1 T 2 T/C 60.0/40.0 9/6 15 T 60 9 C 40 6 ConsensusfromContig7418 115 48 SNP 1 A 1 G 80 12 15 G 80 12 ConsensusfromContig7449 301 84 SNP 1 C 2 T/C 53.3/46.7 8/7 15 T 53.33333333 8 C 46.66666667 7 ConsensusfromContig7542 338 317 SNP 1 A 1 G 100 15 15 G 100 15 ConsensusfromContig8003 365 350 SNP 1 T 1 C 100 15 15 C 100 15 ConsensusfromContig8011 612 529 SNP 1 C 2 T/C 53.3/46.7 8/7 15 T 53.33333333 8 C 46.66666667 7 ConsensusfromContig8011 947 861 SNP 1 C 2 T/C 53.3/46.7 8/7 15 T 53.33333333 8 C 46.66666667 7 ConsensusfromContig8100 40 26 SNP 1 A 1 T 100 15 15 T 100 15 ConsensusfromContig8103 108 95 SNP 1 G 1 A 100 15 15 A 100 15 ConsensusfromContig8175 730 682 SNP 1 A 1 G 100 15 15 G 100 15 ConsensusfromContig8403 526 428 SNP 1 T 1 C 66.7 10 15 C 66.66666667 10 ConsensusfromContig8483 252 222 SNP 1 T 2 C/T 53.3/46.7 8/7 15 C 53.33333333 8 T 46.66666667 7 ConsensusfromContig8483 257 227 SNP 1 A 2 C/A 53.3/46.7 8/7 15 C 53.33333333 8 A 46.66666667 7 ConsensusfromContig8570 65 49 SNP 1 T 2 T/C 60.0/40.0 9/6 15 T 60 9 C 40 6 ConsensusfromContig8636 111 111 SNP 1 A 2 C/A 60.0/40.0 9/6 15 C 60 9 A 40 6 ConsensusfromContig8661 254 18 SNP 1 T 2 C/T 53.3/46.7 8/7 15 C 53.33333333 8 T 46.66666667 7 ConsensusfromContig8682 127 127 SNP 1 C 1 A 100 15 15 A 100 15 ConsensusfromContig8948 279 273 SNP 1 T 1 G 100 15 15 G 100 15 ConsensusfromContig139 138 138 SNP 1 A 2 G/A 62.5/37.5 10/6 16 G 62.5 10 A 37.5 6 ConsensusfromContig296 280 268 SNP 1 G 1 T 75 12 16 T 75 12 ConsensusfromContig313 76 76 SNP 1 T 2 C/T 50.0/50.0 8/8 16 C 50 8 T 50 8 ConsensusfromContig357 203 191 SNP 1 G 1 A 75 12 16 A 75 12 ConsensusfromContig382 125 111 SNP 1 A 2 A/G 62.5/37.5 10/6 16 A 62.5 10 G 37.5 6 ConsensusfromContig584 261 241 SNP 1 C 2 T/C 56.2/43.8 9/7 16 T 56.25 9 C 43.75 7 ConsensusfromContig771 303 296 SNP 1 G 2 G/C 56.2/43.8 9/7 16 G 56.25 9 C 43.75 7 ConsensusfromContig773 42 11 SNP 1 A 1 G 87.5 14 16 G 87.5 14 ConsensusfromContig786 182 129 SNP 1 T 2 C/T 62.5/37.5 10/6 16 C 62.5 10 T 37.5 6 ConsensusfromContig860 99 27 SNP 1 A 1 C 100 16 16 C 100 16 ConsensusfromContig1137 446 339 SNP 1 T 1 C 100 16 16 C 100 16 ConsensusfromContig1137 452 345 SNP 1 T 1 C 100 16 16 C 100 16 ConsensusfromContig1141 226 186 SNP 1 G 1 A 100 16 16 A 100 16 ConsensusfromContig1151 885 773 SNP 1 C 1 T 100 16 16 T 100 16 ConsensusfromContig1172 207 190 SNP 1 C 1 T 75 12 16 T 75 12 ConsensusfromContig1233 718 680 SNP 1 A 1 G 100 16 16 G 100 16 ConsensusfromContig1492 141 89 SNP 1 T 1 C 81.2 13 16 C 81.25 13 ConsensusfromContig1759 424 393 SNP 1 T 1 G 93.8 15 16 G 93.75 15 ConsensusfromContig1819 36 36 SNP 1 A 2 G/A 56.2/43.8 9/7 16 G 56.25 9 A 43.75 7 ConsensusfromContig1976 576 494 SNP 1 C 1 A 75 12 16 A 75 12 ConsensusfromContig2006 862 788 SNP 1 T 1 C 100 16 16 C 100 16 ConsensusfromContig2049 94 94 SNP 1 C 1 T 93.8 15 16 T 93.75 15 ConsensusfromContig2117 174 127 SNP 1 T 2 T/C 56.2/43.8 9/7 16 T 56.25 9 C 43.75 7 ConsensusfromContig2117 412 330 SNP 1 A 2 A/T 62.5/37.5 10/6 16 A 62.5 10 T 37.5 6 ConsensusfromContig2387 95 95 SNP 1 A 1 C 68.8 11 16 C 68.75 11 ConsensusfromContig2414 88 54 SNP 1 A 1 G 68.8 11 16 G 68.75 11 ConsensusfromContig2790 40 21 SNP 1 A 1 G 100 16 16 G 100 16 ConsensusfromContig2798 249 197 SNP 1 C 2 T/C 56.2/43.8 9/7 16 T 56.25 9 C 43.75 7 ConsensusfromContig2823 195 164 SNP 1 A 1 G 93.8 15 16 G 93.75 15 ConsensusfromContig3035 99 79 SNP 1 C 1 T 100 16 16 T 100 16 ConsensusfromContig3038 123 123 SNP 1 G 2 A/G 50.0/50.0 8/8 16 A 50 8 G 50 8 ConsensusfromContig3107 343 341 SNP 1 T 1 C 75 12 16 C 75 12 ConsensusfromContig3110 370 264 SNP 1 T 2 C/T 56.2/43.8 9/7 16 C 56.25 9 T 43.75 7 ConsensusfromContig3118 302 271 SNP 1 T 2 T/C 62.5/37.5 10/6 16 T 62.5 10 C 37.5 6 ConsensusfromContig3271 60 44 SNP 1 T 2 T/C 62.5/37.5 10/6 16 T 62.5 10 C 37.5 6 ConsensusfromContig3354 5 5 SNP 1 A 1 T 93.8 15 16 T 93.75 15 ConsensusfromContig3694 297 211 SNP 1 A 1 G 100 16 16 G 100 16 ConsensusfromContig3734 121 97 SNP 1 A 2 G/A 56.2/43.8 9/7 16 G 56.25 9 A 43.75 7 ConsensusfromContig4019 22 22 SNP 1 A 2 C/A 62.5/37.5 10/6 16 C 62.5 10 A 37.5 6 ConsensusfromContig4058 113 69 SNP 1 A 1 G 100 16 16 G 100 16 ConsensusfromContig4513 122 122 SNP 1 C 1 T 100 16 16 T 100 16 ConsensusfromContig4782 91 61 SNP 1 C 2 A/C 56.2/43.8 9/7 16 A 56.25 9 C 43.75 7 ConsensusfromContig5091 170 140 SNP 1 C 1 A 87.5 14 16 A 87.5 14 ConsensusfromContig5091 586 551 SNP 1 G 1 A 100 16 16 A 100 16 ConsensusfromContig5226 68 37 SNP 1 A 2 A/G 62.5/37.5 10/6 16 A 62.5 10 G 37.5 6 ConsensusfromContig5270 59 46 SNP 1 G 2 C/G 56.2/43.8 9/7 16 C 56.25 9 G 43.75 7 ConsensusfromContig5867 540 479 SNP 1 A 1 C 100 16 16 C 100 16 ConsensusfromContig5975 49 40 SNP 1 A 1 G 100 16 16 G 100 16 ConsensusfromContig5983 100 88 SNP 1 A 1 G 93.8 15 16 G 93.75 15 ConsensusfromContig6099 580 393 SNP 1 C 2 G/C 62.5/37.5 10/6 16 G 62.5 10 C 37.5 6 ConsensusfromContig6331 643 439 SNP 1 T 1 A 68.8 11 16 A 68.75 11 ConsensusfromContig6382 35 22 SNP 1 A 1 G 68.8 11 16 G 68.75 11 ConsensusfromContig6558 68 65 SNP 1 G 2 G/C 50.0/43.8 8/7 16 G 50 8 C 43.75 7 ConsensusfromContig6615 362 322 SNP 1 A 2 A/G 62.5/37.5 10/6 16 A 62.5 10 G 37.5 6 ConsensusfromContig7591 455 437 SNP 1 G 1 A 100 16 16 A 100 16 ConsensusfromContig7727 208 151 SNP 1 G 1 A 100 16 16 A 100 16 ConsensusfromContig7727 209 152 SNP 1 C 1 T 100 16 16 T 100 16 ConsensusfromContig7877 338 292 SNP 1 C 2 C/T 56.2/43.8 9/7 16 C 56.25 9 T 43.75 7 ConsensusfromContig8159 323 317 SNP 1 G 1 A 100 16 16 A 100 16 ConsensusfromContig8171 382 374 SNP 1 C 1 T 93.8 15 16 T 93.75 15 ConsensusfromContig8482 263 198 SNP 1 C 1 T 87.5 14 16 T 87.5 14 ConsensusfromContig8620 261 233 SNP 1 T 2 C/T 56.2/43.8 9/7 16 C 56.25 9 T 43.75 7 ConsensusfromContig8679 217 149 SNP 1 C 1 G 81.2 13 16 G 81.25 13 ConsensusfromContig8686 349 288 SNP 1 T 2 T/C 62.5/37.5 10/6 16 T 62.5 10 C 37.5 6 ConsensusfromContig9189 645 590 SNP 1 T 2 T/C 56.2/43.8 9/7 16 T 56.25 9 C 43.75 7 ConsensusfromContig9222 100 48 SNP 1 C 1 G 87.5 14 16 G 87.5 14 ConsensusfromContig9336 28 28 SNP 1 A 2 A/T 56.2/43.8 9/7 16 A 56.25 9 T 43.75 7 ConsensusfromContig266 225 220 SNP 1 T 2 C/T 52.9/47.1 9/8 17 C 52.94117647 9 T 47.05882353 8 ConsensusfromContig274 123 123 SNP 1 C 1 T 100 17 17 T 100 17 ConsensusfromContig602 120 111 SNP 1 C 2 T/C 58.8/41.2 10/7 17 T 58.82352941 10 C 41.17647059 7 ConsensusfromContig660 118 89 SNP 1 C 1 T 100 17 17 T 100 17 ConsensusfromContig660 121 92 SNP 1 A 1 G 100 17 17 G 100 17 ConsensusfromContig1418 16 16 SNP 1 C 2 T/C 52.9/47.1 9/8 17 T 52.94117647 9 C 47.05882353 8 ConsensusfromContig1783 34 12 SNP 1 G 1 A 100 17 17 A 100 17 ConsensusfromContig2119 477 290 SNP 1 A 1 G 100 17 17 G 100 17 ConsensusfromContig2156 466 441 SNP 1 A 1 G 100 17 17 G 100 17 ConsensusfromContig2227 81 81 SNP 1 G 2 G/A 64.7/35.3 11/6 17 G 64.70588235 11 A 35.29411765 6 ConsensusfromContig2776 467 439 SNP 1 A 1 C 100 17 17 C 100 17 ConsensusfromContig2788 162 155 SNP 1 A 2 G/A 58.8/41.2 10/7 17 G 58.82352941 10 A 41.17647059 7 ConsensusfromContig2823 183 152 SNP 1 C 1 T 100 17 17 T 100 17 ConsensusfromContig2858 79 79 SNP 1 G 2 G/A 58.8/41.2 10/7 17 G 58.82352941 10 A 41.17647059 7 ConsensusfromContig3130 159 159 SNP 1 C 2 C/T 52.9/47.1 9/8 17 C 52.94117647 9 T 47.05882353 8 ConsensusfromContig3195 145 135 SNP 1 C 2 C/G 52.9/47.1 9/8 17 C 52.94117647 9 G 47.05882353 8 ConsensusfromContig3225 33 21 SNP 1 T 1 C 88.2 15 17 C 88.23529412 15 ConsensusfromContig3280 494 439 SNP 1 A 2 A/C 64.7/35.3 11/6 17 A 64.70588235 11 C 35.29411765 6 ConsensusfromContig3389 90 90 SNP 1 G 2 A/G 64.7/35.3 11/6 17 A 64.70588235 11 G 35.29411765 6 ConsensusfromContig3442 370 370 SNP 1 T 2 C/T 52.9/47.1 9/8 17 C 52.94117647 9 T 47.05882353 8 ConsensusfromContig3615 334 334 SNP 1 C 1 T 100 17 17 T 100 17 ConsensusfromContig3759 24 23 SNP 1 G 2 T/G 52.9/47.1 9/8 17 T 52.94117647 9 G 47.05882353 8 ConsensusfromContig4228 339 276 SNP 1 C 2 C/T 64.7/35.3 11/6 17 C 64.70588235 11 T 35.29411765 6 ConsensusfromContig4228 402 339 SNP 1 A 2 A/C 58.8/41.2 10/7 17 A 58.82352941 10 C 41.17647059 7 ConsensusfromContig4344 93 45 SNP 1 T 1 C 100 17 17 C 100 17 ConsensusfromContig4782 728 695 SNP 1 G 2 G/C 64.7/35.3 11/6 17 G 64.70588235 11 C 35.29411765 6 ConsensusfromContig5235 581 202 SNP 1 C 1 G 94.1 16 17 G 94.11764706 16 ConsensusfromContig5287 216 216 SNP 1 T 2 T/A 64.7/35.3 11/6 17 T 64.70588235 11 A 35.29411765 6 ConsensusfromContig5732 201 148 SNP 1 G 2 T/G 52.9/47.1 9/8 17 T 52.94117647 9 G 47.05882353 8 ConsensusfromContig5732 203 150 SNP 1 T 2 C/T 52.9/47.1 9/8 17 C 52.94117647 9 T 47.05882353 8 ConsensusfromContig6435 176 158 SNP 1 C 1 T 100 17 17 T 100 17 ConsensusfromContig6635 113 90 SNP 1 C 2 C/T 52.9/47.1 9/8 17 C 52.94117647 9 T 47.05882353 8 ConsensusfromContig7023 276 85 SNP 1 C 1 A 100 17 17 A 100 17 ConsensusfromContig7051 833 753 SNP 1 C 2 G/C 58.8/41.2 10/7 17 G 58.82352941 10 C 41.17647059 7 ConsensusfromContig7110 384 295 SNP 1 T 2 T/C 64.7/35.3 11/6 17 T 64.70588235 11 C 35.29411765 6 ConsensusfromContig7514 420 420 SNP 1 G 1 C 82.4 14 17 C 82.35294118 14 ConsensusfromContig7564 245 172 SNP 1 G 2 G/T 64.7/35.3 11/6 17 G 64.70588235 11 T 35.29411765 6 ConsensusfromContig7569 427 411 SNP 1 C 1 T 100 17 17 T 100 17 ConsensusfromContig7609 9 7 SNP 1 T 1 C 100 17 17 C 100 17 ConsensusfromContig8090 294 208 SNP 1 G 2 G/A 64.7/35.3 11/6 17 G 64.70588235 11 A 35.29411765 6 ConsensusfromContig8097 243 212 SNP 1 C 1 T 100 17 17 T 100 17 ConsensusfromContig8157 157 133 SNP 1 A 1 G 100 17 17 G 100 17 ConsensusfromContig8198 485 377 SNP 1 T 2 T/G 58.8/41.2 10/7 17 T 58.82352941 10 G 41.17647059 7 ConsensusfromContig8201 21 21 SNP 1 A 1 G 76.5 13 17 G 76.47058824 13 ConsensusfromContig8639 372 338 SNP 1 G 1 A 76.5 13 17 A 76.47058824 13 ConsensusfromContig8890 269 267 SNP 1 C 1 T 100 17 17 T 100 17 ConsensusfromContig9005 376 340 SNP 1 A 1 C 100 17 17 C 100 17 ConsensusfromContig9022 266 163 SNP 1 A 1 G 88.2 15 17 G 88.23529412 15 ConsensusfromContig9177 151 125 SNP 1 T 1 C 100 17 17 C 100 17 ConsensusfromContig9177 312 225 SNP 1 C 2 C/T 58.8/41.2 10/7 17 C 58.82352941 10 T 41.17647059 7 ConsensusfromContig204 120 111 SNP 1 C 2 C/T 61.1/38.9 11/7 18 C 61.11111111 11 T 38.88888889 7 ConsensusfromContig270 408 393 SNP 1 G 1 A 100 18 18 A 100 18 ConsensusfromContig554 216 188 SNP 1 C 1 T 94.4 17 18 T 94.44444444 17 ConsensusfromContig773 300 269 SNP 1 A 1 G 100 18 18 G 100 18 ConsensusfromContig786 303 231 SNP 1 A 2 A/G 55.6/44.4 10/8 18 A 55.55555556 10 G 44.44444444 8 ConsensusfromContig1418 213 213 SNP 1 T 2 C/T 55.6/44.4 10/8 18 C 55.55555556 10 T 44.44444444 8 ConsensusfromContig1546 134 121 SNP 1 T 1 G 66.7 12 18 G 66.66666667 12 ConsensusfromContig1647 154 153 SNP 1 A 2 A/G 50.0/50.0 9/9 18 A 50 9 G 50 9 ConsensusfromContig1647 247 246 SNP 1 C 2 C/T 61.1/38.9 11/7 18 C 61.11111111 11 T 38.88888889 7 ConsensusfromContig1852 562 402 SNP 1 T 2 T/G 55.6/44.4 10/8 18 T 55.55555556 10 G 44.44444444 8 ConsensusfromContig2108 145 96 SNP 1 T 2 C/T 55.6/44.4 10/8 18 C 55.55555556 10 T 44.44444444 8 ConsensusfromContig2317 36 27 SNP 1 T 1 C 77.8 14 18 C 77.77777778 14 ConsensusfromContig2466 276 237 SNP 1 A 1 C 94.4 17 18 C 94.44444444 17 ConsensusfromContig2641 711 530 SNP 1 C 1 G 66.7 12 18 G 66.66666667 12 ConsensusfromContig2645 48 48 SNP 1 T 1 C 100 18 18 C 100 18 ConsensusfromContig2684 86 80 SNP 1 C 2 C/T 61.1/38.9 11/7 18 C 61.11111111 11 T 38.88888889 7 ConsensusfromContig3107 340 338 SNP 1 T 1 C 77.8 14 18 C 77.77777778 14 ConsensusfromContig3130 130 130 SNP 1 C 2 T/C 55.6/44.4 10/8 18 T 55.55555556 10 C 44.44444444 8 ConsensusfromContig3234 349 333 SNP 1 A 1 T 100 18 18 T 100 18 ConsensusfromContig3360 166 166 SNP 1 A 2 A/G 61.1/38.9 11/7 18 A 61.11111111 11 G 38.88888889 7 ConsensusfromContig3374 254 248 SNP 1 G 2 A/G 55.6/44.4 10/8 18 A 55.55555556 10 G 44.44444444 8 ConsensusfromContig3522 427 338 SNP 1 T 1 G 100 18 18 G 100 18 ConsensusfromContig3942 217 174 SNP 1 G 2 A/G 61.1/38.9 11/7 18 A 61.11111111 11 G 38.88888889 7 ConsensusfromContig4049 562 395 SNP 1 C 1 T 100 18 18 T 100 18 ConsensusfromContig4493 257 75 SNP 1 T 2 T/G 61.1/38.9 11/7 18 T 61.11111111 11 G 38.88888889 7 ConsensusfromContig4668 372 372 SNP 1 C 1 T 100 18 18 T 100 18 ConsensusfromContig5201 325 134 SNP 1 A 1 C 66.7 12 18 C 66.66666667 12 ConsensusfromContig5270 259 245 SNP 1 T 1 A 100 18 18 A 100 18 ConsensusfromContig5311 95 90 SNP 1 G 1 A 66.7 12 18 A 66.66666667 12 ConsensusfromContig5630 209 138 SNP 1 T 2 T/C 55.6/38.9 10/7 18 T 55.55555556 10 C 38.88888889 7 ConsensusfromContig6000 440 407 SNP 1 C 2 C/T 50.0/50.0 9/9 18 C 50 9 T 50 9 ConsensusfromContig6155 319 230 SNP 1 C 1 T 66.7 12 18 T 66.66666667 12 ConsensusfromContig6207 159 158 SNP 1 T 2 T/C 55.6/44.4 10/8 18 T 55.55555556 10 C 44.44444444 8 ConsensusfromContig6215 102 102 SNP 1 G 1 T 100 18 18 T 100 18 ConsensusfromContig6329 205 150 SNP 1 G 1 A 83.3 15 18 A 83.33333333 15 ConsensusfromContig6507 168 154 SNP 1 A 2 G/A 61.1/38.9 11/7 18 G 61.11111111 11 A 38.88888889 7 ConsensusfromContig6526 93 75 SNP 1 A 1 G 100 18 18 G 100 18 ConsensusfromContig6631 232 106 SNP 1 C 2 C/T 50.0/50.0 9/9 18 C 50 9 T 50 9 ConsensusfromContig6657 393 323 SNP 1 C 2 C/A 61.1/38.9 11/7 18 C 61.11111111 11 A 38.88888889 7 ConsensusfromContig6681 280 264 SNP 1 A 1 G 72.2 13 18 G 72.22222222 13 ConsensusfromContig6807 313 223 SNP 1 C 2 T/C 61.1/38.9 11/7 18 T 61.11111111 11 C 38.88888889 7 ConsensusfromContig7110 240 154 SNP 1 A 2 A/T 50.0/50.0 9/9 18 A 50 9 T 50 9 ConsensusfromContig7113 334 224 SNP 1 T 1 A 83.3 15 18 A 83.33333333 15 ConsensusfromContig7192 220 91 SNP 1 T 1 C 100 18 18 C 100 18 ConsensusfromContig8403 682 576 SNP 1 T 1 C 77.8 14 18 C 77.77777778 14 ConsensusfromContig8589 172 172 SNP 1 T 2 C/T 55.6/44.4 10/8 18 C 55.55555556 10 T 44.44444444 8 ConsensusfromContig8636 227 227 SNP 1 C 2 C/T 61.1/38.9 11/7 18 C 61.11111111 11 T 38.88888889 7 ConsensusfromContig8789 375 325 SNP 1 C 1 T 100 18 18 T 100 18 ConsensusfromContig8797 473 368 SNP 1 C 1 T 100 18 18 T 100 18 ConsensusfromContig8895 227 227 SNP 1 T 2 T/C 61.1/38.9 11/7 18 T 61.11111111 11 C 38.88888889 7 ConsensusfromContig8951 317 316 SNP 1 C 2 C/T 55.6/44.4 10/8 18 C 55.55555556 10 T 44.44444444 8 ConsensusfromContig9002 439 398 SNP 1 G 2 G/A 55.6/44.4 10/8 18 G 55.55555556 10 A 44.44444444 8 ConsensusfromContig9006 286 286 SNP 1 A 1 G 100 18 18 G 100 18 ConsensusfromContig9022 253 150 SNP 1 T 2 T/C 55.6/44.4 10/8 18 T 55.55555556 10 C 44.44444444 8 ConsensusfromContig9270 132 125 SNP 1 T 2 T/A 61.1/38.9 11/7 18 T 61.11111111 11 A 38.88888889 7 ConsensusfromContig244 133 111 SNP 1 G 2 C/G 57.9/42.1 11/8 19 C 57.89473684 11 G 42.10526316 8 ConsensusfromContig928 226 211 SNP 1 A 1 G 94.7 18 19 G 94.73684211 18 ConsensusfromContig1059 375 199 SNP 1 G 2 G/T 52.6/47.4 10/9 19 G 52.63157895 10 T 47.36842105 9 ConsensusfromContig1187 748 629 SNP 1 T 1 G 68.4 13 19 G 68.42105263 13 ConsensusfromContig1192 143 93 SNP 1 C 1 T 100 19 19 T 100 19 ConsensusfromContig1203 212 139 SNP 1 T 2 T/C 52.6/47.4 10/9 19 T 52.63157895 10 C 47.36842105 9 ConsensusfromContig1557 310 194 SNP 1 T 2 T/C 52.6/47.4 10/9 19 T 52.63157895 10 C 47.36842105 9 ConsensusfromContig1570 209 209 SNP 1 A 1 G 100 19 19 G 100 19 ConsensusfromContig1593 312 304 SNP 1 C 2 C/T 57.9/42.1 11/8 19 C 57.89473684 11 T 42.10526316 8 ConsensusfromContig1647 401 400 SNP 1 T 2 C/T 57.9/42.1 11/8 19 C 57.89473684 11 T 42.10526316 8 ConsensusfromContig1730 330 270 SNP 1 T 1 A 100 19 19 A 100 19 ConsensusfromContig1759 226 195 SNP 1 G 2 G/A 57.9/42.1 11/8 19 G 57.89473684 11 A 42.10526316 8 ConsensusfromContig1793 186 168 SNP 1 C 2 C/G 52.6/47.4 10/9 19 C 52.63157895 10 G 47.36842105 9 ConsensusfromContig1976 393 318 SNP 1 G 2 G/A 52.6/47.4 10/9 19 G 52.63157895 10 A 47.36842105 9 ConsensusfromContig2045 514 492 SNP 1 A 1 C 100 19 19 C 100 19 ConsensusfromContig2070 98 98 SNP 1 G 2 G/A 63.2/36.8 12/7 19 G 63.15789474 12 A 36.84210526 7 ConsensusfromContig2130 12 7 SNP 1 T 1 C 100 19 19 C 100 19 ConsensusfromContig2134 272 262 SNP 1 A 1 T 100 19 19 T 100 19 ConsensusfromContig2313 279 204 SNP 1 C 2 C/T 63.2/36.8 12/7 19 C 63.15789474 12 T 36.84210526 7 ConsensusfromContig2414 157 123 SNP 1 T 2 T/C 63.2/36.8 12/7 19 T 63.15789474 12 C 36.84210526 7 ConsensusfromContig2466 274 235 SNP 1 G 1 A 89.5 17 19 A 89.47368421 17 ConsensusfromContig2508 277 271 SNP 1 A 1 T 63.2 12 19 T 63.15789474 12 ConsensusfromContig2624 103 73 SNP 1 T 2 G/T 57.9/42.1 11/8 19 G 57.89473684 11 T 42.10526316 8 ConsensusfromContig2653 124 66 SNP 1 C 2 G/C 57.9/42.1 11/8 19 G 57.89473684 11 C 42.10526316 8 ConsensusfromContig2766 322 254 SNP 1 C 2 C/G 63.2/36.8 12/7 19 C 63.15789474 12 G 36.84210526 7 ConsensusfromContig3110 407 301 SNP 1 C 1 T 100 19 19 T 100 19 ConsensusfromContig3228 287 287 SNP 1 G 1 T 73.7 14 19 T 73.68421053 14 ConsensusfromContig3261 755 514 SNP 1 C 1 T 94.7 18 19 T 94.73684211 18 ConsensusfromContig3366 58 58 SNP 1 G 2 T/G 57.9/42.1 11/8 19 T 57.89473684 11 G 42.10526316 8 ConsensusfromContig3464 114 114 SNP 1 T 2 T/C 52.6/47.4 10/9 19 T 52.63157895 10 C 47.36842105 9 ConsensusfromContig3817 119 119 SNP 1 C 1 G 78.9 15 19 G 78.94736842 15 ConsensusfromContig3893 217 172 SNP 1 C 1 T 100 19 19 T 100 19 ConsensusfromContig4226 340 127 SNP 1 G 1 C 100 19 19 C 100 19 ConsensusfromContig4573 249 174 SNP 1 C 1 T 100 19 19 T 100 19 ConsensusfromContig4778 13 8 SNP 1 G 1 A 100 19 19 A 100 19 ConsensusfromContig4904 344 339 SNP 1 T 2 T/A 63.2/36.8 12/7 19 T 63.15789474 12 A 36.84210526 7 ConsensusfromContig5557 401 248 SNP 1 C 1 T 100 19 19 T 100 19 ConsensusfromContig5762 622 578 SNP 1 C 1 A 100 19 19 A 100 19 ConsensusfromContig5874 189 89 SNP 1 C 1 G 100 19 19 G 100 19 ConsensusfromContig6000 371 338 SNP 1 G 2 G/C 52.6/47.4 10/9 19 G 52.63157895 10 C 47.36842105 9 ConsensusfromContig6482 268 229 SNP 1 G 2 G/A 57.9/36.8 11/7 19 G 57.89473684 11 A 36.84210526 7 ConsensusfromContig7013 298 298 SNP 1 A 1 G 100 19 19 G 100 19 ConsensusfromContig7041 82 78 SNP 1 A 1 C 84.2 16 19 C 84.21052632 16 ConsensusfromContig7113 549 439 SNP 1 C 1 T 100 19 19 T 100 19 ConsensusfromContig7409 74 74 SNP 1 T 1 C 94.7 18 19 C 94.73684211 18 ConsensusfromContig9002 147 110 SNP 1 C 2 C/A 52.6/47.4 10/9 19 C 52.63157895 10 A 47.36842105 9 ConsensusfromContig357 113 101 SNP 1 A 2 T/A 60.0/40.0 12/8 20 T 60 12 A 40 8 ConsensusfromContig793 155 51 SNP 1 A 1 C 80 16 20 C 80 16 ConsensusfromContig828 76 73 SNP 1 T 1 C 100 20 20 C 100 20 ConsensusfromContig1137 191 85 SNP 1 T 1 G 95 19 20 G 95 19 ConsensusfromContig1647 130 129 SNP 1 G 2 C/G 50.0/50.0 10/10 20 C 50 10 G 50 10 ConsensusfromContig1647 250 249 SNP 1 T 2 T/C 55.0/45.0 11/9 20 T 55 11 C 45 9 ConsensusfromContig1650 252 151 SNP 1 A 2 A/G 65.0/35.0 13/7 20 A 65 13 G 35 7 ConsensusfromContig1734 154 143 SNP 1 C 2 T/C 65.0/35.0 13/7 20 T 65 13 C 35 7 ConsensusfromContig1998 585 403 SNP 1 C 1 T 100 20 20 T 100 20 ConsensusfromContig2177 169 164 SNP 1 T 2 C/T 55.0/45.0 11/9 20 C 55 11 T 45 9 ConsensusfromContig2177 425 403 SNP 1 G 1 A 90 18 20 A 90 18 ConsensusfromContig2507 321 300 SNP 1 G 1 A 100 20 20 A 100 20 ConsensusfromContig2507 428 407 SNP 1 C 2 T/C 60.0/40.0 12/8 20 T 60 12 C 40 8 ConsensusfromContig2557 128 119 SNP 1 G 2 G/A 60.0/40.0 12/8 20 G 60 12 A 40 8 ConsensusfromContig2803 77 39 SNP 1 T 2 T/G 60.0/40.0 12/8 20 T 60 12 G 40 8 ConsensusfromContig3196 227 219 SNP 1 T 2 C/T 55.0/45.0 11/9 20 C 55 11 T 45 9 ConsensusfromContig3529 162 162 SNP 1 C 1 T 100 20 20 T 100 20 ConsensusfromContig3572 236 170 SNP 1 A 1 C 95 19 20 C 95 19 ConsensusfromContig3581 329 329 SNP 1 C 1 T 85 17 20 T 85 17 ConsensusfromContig3701 175 128 SNP 1 A 1 C 100 20 20 C 100 20 ConsensusfromContig3840 273 221 SNP 1 A 1 C 100 20 20 C 100 20 ConsensusfromContig3958 377 371 SNP 1 C 2 T/C 65.0/35.0 13/7 20 T 65 13 C 35 7 ConsensusfromContig4037 20 20 SNP 1 G 2 A/G 65.0/35.0 13/7 20 A 65 13 G 35 7 ConsensusfromContig4257 317 282 SNP 1 G 1 A 100 20 20 A 100 20 ConsensusfromContig4530 552 410 SNP 1 T 1 A 100 20 20 A 100 20 ConsensusfromContig4573 252 177 SNP 1 A 1 C 100 20 20 C 100 20 ConsensusfromContig4966 14 5 SNP 1 T 1 C 75 15 20 C 75 15 ConsensusfromContig5162 268 56 SNP 1 T 1 A 100 20 20 A 100 20 ConsensusfromContig5186 192 32 SNP 1 A 1 T 100 20 20 T 100 20 ConsensusfromContig5749 83 56 SNP 1 T 2 T/C 60.0/40.0 12/8 20 T 60 12 C 40 8 ConsensusfromContig5975 129 109 SNP 1 A 2 A/C 55.0/45.0 11/9 20 A 55 11 C 45 9 ConsensusfromContig6132 333 330 SNP 1 T 2 C/T 55.0/40.0 11/8 20 C 55 11 T 40 8 ConsensusfromContig6215 455 415 SNP 1 G 1 A 100 20 20 A 100 20 ConsensusfromContig6570 82 82 SNP 1 G 2 G/A 60.0/40.0 12/8 20 G 60 12 A 40 8 ConsensusfromContig7041 80 76 SNP 1 A 1 T 100 20 20 T 100 20 ConsensusfromContig7051 179 120 SNP 1 C 1 T 100 20 20 T 100 20 ConsensusfromContig7179 75 56 SNP 1 C 2 C/T 60.0/40.0 12/8 20 C 60 12 T 40 8 ConsensusfromContig7501 306 269 SNP 1 G 2 A/G 60.0/40.0 12/8 20 A 60 12 G 40 8 ConsensusfromContig7664 117 31 SNP 1 T 1 A 90 18 20 A 90 18 ConsensusfromContig7696 167 131 SNP 1 A 2 C/A 60.0/40.0 12/8 20 C 60 12 A 40 8 ConsensusfromContig7810 377 365 SNP 1 T 2 C/T 60.0/40.0 12/8 20 C 60 12 T 40 8 ConsensusfromContig8075 489 357 SNP 1 G 1 C 85 17 20 C 85 17 ConsensusfromContig8155 276 93 SNP 1 G 1 A 95 19 20 A 95 19 ConsensusfromContig8624 39 32 SNP 1 A 2 C/A 55.0/45.0 11/9 20 C 55 11 A 45 9 ConsensusfromContig8777 121 121 SNP 1 T 2 C/T 50.0/50.0 10/10 20 C 50 10 T 50 10 ConsensusfromContig8903 125 125 SNP 1 G 2 G/A 60.0/40.0 12/8 20 G 60 12 A 40 8 ConsensusfromContig9005 353 317 SNP 1 C 1 T 100 20 20 T 100 20 ConsensusfromContig9300 217 119 SNP 1 G 2 A/G 50.0/50.0 10/10 20 A 50 10 G 50 10 ConsensusfromContig9359 62 62 SNP 1 T 1 A 100 20 20 A 100 20 ConsensusfromContig40 17 17 SNP 1 C 1 T 100 21 21 T 100 21 ConsensusfromContig602 273 264 SNP 1 T 2 C/T 52.4/47.6 11/10 21 C 52.38095238 11 T 47.61904762 10 ConsensusfromContig651 182 116 SNP 1 A 1 G 95.2 20 21 G 95.23809524 20 ConsensusfromContig713 254 246 SNP 1 G 1 A 100 21 21 A 100 21 ConsensusfromContig1390 199 169 SNP 1 G 1 A 95.2 20 21 A 95.23809524 20 ConsensusfromContig1686 356 327 SNP 1 A 1 G 66.7 14 21 G 66.66666667 14 ConsensusfromContig2045 515 493 SNP 1 C 1 T 100 21 21 T 100 21 ConsensusfromContig2293 23 10 SNP 1 T 2 T/C 57.1/42.9 12/9 21 T 57.14285714 12 C 42.85714286 9 ConsensusfromContig2798 346 294 SNP 1 A 1 T 76.2 16 21 T 76.19047619 16 ConsensusfromContig2803 96 58 SNP 1 C 2 A/C 52.4/47.6 11/10 21 A 52.38095238 11 C 47.61904762 10 ConsensusfromContig2987 28 28 SNP 1 A 2 A/C 52.4/42.9 11/9 21 A 52.38095238 11 C 42.85714286 9 ConsensusfromContig3271 243 227 SNP 1 T 2 A/T 61.9/38.1 13/8 21 A 61.9047619 13 T 38.0952381 8 ConsensusfromContig3341 456 198 SNP 1 A 1 G 85.7 18 21 G 85.71428571 18 ConsensusfromContig3358 289 284 SNP 1 G 1 A 100 21 21 A 100 21 ConsensusfromContig4571 306 265 SNP 1 G 1 A 71.4 15 21 A 71.42857143 15 ConsensusfromContig4764 83 65 SNP 1 T 1 C 85.7 18 21 C 85.71428571 18 ConsensusfromContig5029 116 99 Complex SNP 1 A 2 G/C 52.4/38.1 11/8 21 G 52.38095238 11 C 38.0952381 8 ConsensusfromContig5233 350 67 SNP 1 A 1 T 61.9 13 21 T 61.9047619 13 ConsensusfromContig5362 448 436 SNP 1 T 2 T/C 57.1/42.9 12/9 21 T 57.14285714 12 C 42.85714286 9 ConsensusfromContig5617 13 5 SNP 1 T 2 C/T 52.4/47.6 11/10 21 C 52.38095238 11 T 47.61904762 10 ConsensusfromContig5728 615 466 SNP 1 C 2 C/G 57.1/42.9 12/9 21 C 57.14285714 12 G 42.85714286 9 ConsensusfromContig5874 331 227 SNP 1 A 2 A/G 57.1/42.9 12/9 21 A 57.14285714 12 G 42.85714286 9 ConsensusfromContig6176 71 69 SNP 1 G 2 A/G 61.9/38.1 13/8 21 A 61.9047619 13 G 38.0952381 8 ConsensusfromContig6352 276 258 SNP 1 A 1 G 71.4 15 21 G 71.42857143 15 ConsensusfromContig6546 227 186 SNP 1 C 2 T/C 57.1/42.9 12/9 21 T 57.14285714 12 C 42.85714286 9 ConsensusfromContig6546 410 369 SNP 1 T 2 C/T 52.4/47.6 11/10 21 C 52.38095238 11 T 47.61904762 10 ConsensusfromContig7542 231 210 SNP 1 A 1 G 100 21 21 G 100 21 ConsensusfromContig7903 394 338 SNP 1 A 1 G 100 21 21 G 100 21 ConsensusfromContig7937 147 134 SNP 1 A 2 A/G 57.1/42.9 12/9 21 A 57.14285714 12 G 42.85714286 9 ConsensusfromContig8047 645 431 SNP 1 T 2 C/T 57.1/42.9 12/9 21 C 57.14285714 12 T 42.85714286 9 ConsensusfromContig8067 372 331 SNP 1 C 1 G 95.2 20 21 G 95.23809524 20 ConsensusfromContig8403 771 665 SNP 1 G 1 A 76.2 16 21 A 76.19047619 16 ConsensusfromContig8619 290 166 SNP 1 T 2 T/C 52.4/47.6 11/10 21 T 52.38095238 11 C 47.61904762 10 ConsensusfromContig9014 145 142 SNP 1 G 2 A/G 61.9/38.1 13/8 21 A 61.9047619 13 G 38.0952381 8 ConsensusfromContig9172 487 435 SNP 1 G 1 A 100 21 21 A 100 21 ConsensusfromContig9177 352 265 SNP 1 G 1 A 85.7 18 21 A 85.71428571 18 ConsensusfromContig36 202 163 SNP 1 A 2 G/A 54.5/45.5 12/10 22 G 54.54545455 12 A 45.45454545 10 ConsensusfromContig602 143 134 SNP 1 T 1 A 77.3 17 22 A 77.27272727 17 ConsensusfromContig672 366 345 SNP 1 C 1 T 68.2 15 22 T 68.18181818 15 ConsensusfromContig771 297 290 SNP 1 T 2 T/C 63.6/36.4 14/8 22 T 63.63636364 14 C 36.36363636 8 ConsensusfromContig1137 190 84 SNP 1 C 1 T 86.4 19 22 T 86.36363636 19 ConsensusfromContig1525 330 242 SNP 1 C 2 C/T 59.1/40.9 13/9 22 C 59.09090909 13 T 40.90909091 9 ConsensusfromContig1686 495 465 SNP 1 C 2 C/T 50.0/50.0 11/11 22 C 50 11 T 50 11 ConsensusfromContig2107 189 98 SNP 1 A 1 T 100 22 22 T 100 22 ConsensusfromContig2119 416 229 SNP 1 A 1 G 95.5 21 22 G 95.45454545 21 ConsensusfromContig2192 134 134 SNP 1 G 2 G/T 54.5/45.5 12/10 22 G 54.54545455 12 T 45.45454545 10 ConsensusfromContig2304 37 26 SNP 1 G 1 A 95.5 21 22 A 95.45454545 21 ConsensusfromContig2537 208 203 SNP 1 A 1 T 90.9 20 22 T 90.90909091 20 ConsensusfromContig2624 101 71 SNP 1 T 2 C/T 54.5/45.5 12/10 22 C 54.54545455 12 T 45.45454545 10 ConsensusfromContig2857 267 211 SNP 1 G 2 A/G 63.6/36.4 14/8 22 A 63.63636364 14 G 36.36363636 8 ConsensusfromContig2987 177 177 SNP 1 G 1 A 95.5 21 22 A 95.45454545 21 ConsensusfromContig3238 243 219 SNP 1 C 2 A/C 50.0/50.0 11/11 22 A 50 11 C 50 11 ConsensusfromContig3474 201 196 SNP 1 G 2 G/A 63.6/36.4 14/8 22 G 63.63636364 14 A 36.36363636 8 ConsensusfromContig3528 197 104 SNP 1 A 2 A/C 50.0/50.0 11/11 22 A 50 11 C 50 11 ConsensusfromContig3554 207 174 SNP 1 C 1 T 68.2 15 22 T 68.18181818 15 ConsensusfromContig3707 89 89 SNP 1 N 1 A 100 22 22 A 100 22 ConsensusfromContig3958 41 41 SNP 1 T 1 A 100 22 22 A 100 22 ConsensusfromContig3958 231 231 SNP 1 C 2 T/C 59.1/40.9 13/9 22 T 59.09090909 13 C 40.90909091 9 ConsensusfromContig3971 231 217 SNP 1 A 2 T/A 54.5/45.5 12/10 22 T 54.54545455 12 A 45.45454545 10 ConsensusfromContig4037 304 304 SNP 1 A 2 A/G 59.1/40.9 13/9 22 A 59.09090909 13 G 40.90909091 9 ConsensusfromContig4229 451 378 SNP 1 T 2 G/T 63.6/36.4 14/8 22 G 63.63636364 14 T 36.36363636 8 ConsensusfromContig4828 396 359 SNP 1 A 1 G 100 22 22 G 100 22 ConsensusfromContig5205 298 282 SNP 1 T 2 T/C 54.5/45.5 12/10 22 T 54.54545455 12 C 45.45454545 10 ConsensusfromContig5636 365 365 SNP 1 A 2 G/A 59.1/40.9 13/9 22 G 59.09090909 13 A 40.90909091 9 ConsensusfromContig6263 419 419 SNP 1 G 2 T/G 54.5/45.5 12/10 22 T 54.54545455 12 G 45.45454545 10 ConsensusfromContig6330 357 255 SNP 1 T 2 T/A 63.6/36.4 14/8 22 T 63.63636364 14 A 36.36363636 8 ConsensusfromContig6330 423 321 SNP 1 C 2 C/T 63.6/36.4 14/8 22 C 63.63636364 14 T 36.36363636 8 ConsensusfromContig7007 345 321 SNP 1 A 1 C 100 22 22 C 100 22 ConsensusfromContig7299 368 353 SNP 1 C 1 T 100 22 22 T 100 22 ConsensusfromContig7418 407 334 SNP 1 T 2 G/T 59.1/40.9 13/9 22 G 59.09090909 13 T 40.90909091 9 ConsensusfromContig7436 53 46 SNP 1 G 1 T 100 22 22 T 100 22 ConsensusfromContig7487 154 153 SNP 1 C 2 C/T 59.1/40.9 13/9 22 C 59.09090909 13 T 40.90909091 9 ConsensusfromContig8075 426 294 SNP 1 G 1 T 81.8 18 22 T 81.81818182 18 ConsensusfromContig8201 173 154 SNP 1 A 1 G 100 22 22 G 100 22 ConsensusfromContig8391 493 416 SNP 1 C 1 G 100 22 22 G 100 22 ConsensusfromContig8403 703 597 SNP 1 G 2 A/G 50.0/50.0 11/11 22 A 50 11 G 50 11 ConsensusfromContig8489 259 214 SNP 1 T 2 T/C 59.1/40.9 13/9 22 T 59.09090909 13 C 40.90909091 9 ConsensusfromContig8777 107 107 SNP 1 G 2 A/G 50.0/50.0 11/11 22 A 50 11 G 50 11 ConsensusfromContig8895 172 172 SNP 1 C 2 T/C 63.6/36.4 14/8 22 T 63.63636364 14 C 36.36363636 8 ConsensusfromContig350 29 29 SNP 1 T 2 C/T 52.2/47.8 12/11 23 C 52.17391304 12 T 47.82608696 11 ConsensusfromContig426 279 243 SNP 1 A 1 C 78.3 18 23 C 78.26086957 18 ConsensusfromContig821 238 238 SNP 1 C 1 T 100 23 23 T 100 23 ConsensusfromContig1141 534 429 SNP 1 A 1 T 69.6 16 23 T 69.56521739 16 ConsensusfromContig1167 221 153 SNP 1 T 2 T/A 52.2/47.8 12/11 23 T 52.17391304 12 A 47.82608696 11 ConsensusfromContig1582 127 95 SNP 1 A 2 G/A 52.2/47.8 12/11 23 G 52.17391304 12 A 47.82608696 11 ConsensusfromContig1647 133 132 SNP 1 C 2 T/C 52.2/47.8 12/11 23 T 52.17391304 12 C 47.82608696 11 ConsensusfromContig2377 398 176 SNP 1 G 1 A 100 23 23 A 100 23 ConsensusfromContig3215 214 112 SNP 1 G 2 A/G 60.9/39.1 14/9 23 A 60.86956522 14 G 39.13043478 9 ConsensusfromContig3356 284 238 SNP 1 G 2 G/A 60.9/39.1 14/9 23 G 60.86956522 14 A 39.13043478 9 ConsensusfromContig3373 216 179 SNP 1 A 1 T 100 23 23 T 100 23 ConsensusfromContig3377 574 537 SNP 1 T 2 T/C 56.5/43.5 13/10 23 T 56.52173913 13 C 43.47826087 10 ConsensusfromContig3531 162 137 SNP 1 T 1 C 100 23 23 C 100 23 ConsensusfromContig3604 48 48 SNP 1 C 1 T 100 23 23 T 100 23 ConsensusfromContig3744 386 352 SNP 1 A 2 A/G 52.2/47.8 12/11 23 A 52.17391304 12 G 47.82608696 11 ConsensusfromContig3895 273 273 SNP 1 C 1 T 100 23 23 T 100 23 ConsensusfromContig4006 45 36 SNP 1 G 1 A 100 23 23 A 100 23 ConsensusfromContig4999 286 214 SNP 1 T 1 A 65.2 15 23 A 65.2173913 15 ConsensusfromContig5080 339 278 SNP 1 A 2 G/A 56.5/43.5 13/10 23 G 56.52173913 13 A 43.47826087 10 ConsensusfromContig5423 221 197 SNP 1 T 1 C 100 23 23 C 100 23 ConsensusfromContig5551 459 354 SNP 1 C 1 T 95.7 22 23 T 95.65217391 22 ConsensusfromContig6157 52 52 SNP 1 G 1 T 100 23 23 T 100 23 ConsensusfromContig6364 382 377 SNP 1 C 1 T 100 23 23 T 100 23 ConsensusfromContig6526 87 69 SNP 1 C 1 T 78.3 18 23 T 78.26086957 18 ConsensusfromContig6570 77 77 SNP 1 G 2 G/T 52.2/43.5 12/10 23 G 52.17391304 12 T 43.47826087 10 ConsensusfromContig6667 67 48 SNP 1 T 1 A 87 20 23 A 86.95652174 20 ConsensusfromContig6681 330 314 SNP 1 T 2 T/C 60.9/39.1 14/9 23 T 60.86956522 14 C 39.13043478 9 ConsensusfromContig7111 342 296 SNP 1 C 1 T 100 23 23 T 100 23 ConsensusfromContig7145 25 25 SNP 1 A 2 A/T 56.5/43.5 13/10 23 A 56.52173913 13 T 43.47826087 10 ConsensusfromContig7370 244 244 SNP 1 A 2 C/A 56.5/43.5 13/10 23 C 56.52173913 13 A 43.47826087 10 ConsensusfromContig7409 23 23 SNP 1 C 1 T 100 23 23 T 100 23 ConsensusfromContig8075 814 682 SNP 1 A 2 C/A 52.2/47.8 12/11 23 C 52.17391304 12 A 47.82608696 11 ConsensusfromContig8301 628 284 SNP 1 G 2 G/A 56.5/43.5 13/10 23 G 56.52173913 13 A 43.47826087 10 ConsensusfromContig8703 462 449 SNP 1 T 2 T/C 60.9/39.1 14/9 23 T 60.86956522 14 C 39.13043478 9 ConsensusfromContig9034 302 191 SNP 1 A 2 G/A 56.5/43.5 13/10 23 G 56.52173913 13 A 43.47826087 10 ConsensusfromContig266 55 50 SNP 1 C 1 A 83.3 20 24 A 83.33333333 20 ConsensusfromContig665 26 21 SNP 1 T 1 C 79.2 19 24 C 79.16666667 19 ConsensusfromContig773 265 234 SNP 1 G 1 A 66.7 16 24 A 66.66666667 16 ConsensusfromContig820 193 182 SNP 1 A 1 G 100 24 24 G 100 24 ConsensusfromContig937 95 88 SNP 1 C 2 T/C 54.2/45.8 13/11 24 T 54.16666667 13 C 45.83333333 11 ConsensusfromContig1187 96 14 SNP 1 T 2 T/G 54.2/45.8 13/11 24 T 54.16666667 13 G 45.83333333 11 ConsensusfromContig1569 72 60 SNP 1 G 1 T 66.7 16 24 T 66.66666667 16 ConsensusfromContig2017 273 195 SNP 1 C 1 T 95.8 23 24 T 95.83333333 23 ConsensusfromContig2701 408 366 SNP 1 G 1 A 95.8 23 24 A 95.83333333 23 ConsensusfromContig2713 74 40 SNP 1 T 1 G 100 24 24 G 100 24 ConsensusfromContig2764 87 56 SNP 1 A 1 G 83.3 20 24 G 83.33333333 20 ConsensusfromContig2986 232 213 SNP 1 T 1 C 66.7 16 24 C 66.66666667 16 ConsensusfromContig3130 115 115 SNP 1 A 1 C 83.3 20 24 C 83.33333333 20 ConsensusfromContig3225 49 37 SNP 1 A 2 G/A 58.3/41.7 14/10 24 G 58.33333333 14 A 41.66666667 10 ConsensusfromContig3295 269 269 SNP 1 C 2 C/T 62.5/37.5 15/9 24 C 62.5 15 T 37.5 9 ConsensusfromContig3313 1223 753 SNP 1 T 2 A/T 62.5/37.5 15/9 24 A 62.5 15 T 37.5 9 ConsensusfromContig3360 296 296 SNP 1 G 1 A 75 18 24 A 75 18 ConsensusfromContig3394 27 26 SNP 1 T 2 A/T 58.3/41.7 14/10 24 A 58.33333333 14 T 41.66666667 10 ConsensusfromContig3443 36 7 SNP 1 T 1 C 100 24 24 C 100 24 ConsensusfromContig3464 105 105 SNP 1 T 2 T/C 62.5/37.5 15/9 24 T 62.5 15 C 37.5 9 ConsensusfromContig3744 399 365 SNP 1 C 1 T 100 24 24 T 100 24 ConsensusfromContig4049 359 192 SNP 1 G 2 T/G 58.3/41.7 14/10 24 T 58.33333333 14 G 41.66666667 10 ConsensusfromContig4522 97 60 SNP 1 C 1 T 100 24 24 T 100 24 ConsensusfromContig5119 218 188 SNP 1 A 2 A/T 54.2/45.8 13/11 24 A 54.16666667 13 T 45.83333333 11 ConsensusfromContig5140 539 533 SNP 1 G 2 A/G 62.5/37.5 15/9 24 A 62.5 15 G 37.5 9 ConsensusfromContig5172 90 43 SNP 1 G 2 T/G 62.5/37.5 15/9 24 T 62.5 15 G 37.5 9 ConsensusfromContig5234 47 15 SNP 1 A 1 G 100 24 24 G 100 24 ConsensusfromContig5311 104 99 SNP 1 C 2 T/C 54.2/45.8 13/11 24 T 54.16666667 13 C 45.83333333 11 ConsensusfromContig6224 356 333 SNP 1 G 1 A 100 24 24 A 100 24 ConsensusfromContig6868 331 169 SNP 1 A 1 G 66.7 16 24 G 66.66666667 16 ConsensusfromContig7370 250 250 SNP 1 A 2 A/G 54.2/45.8 13/11 24 A 54.16666667 13 G 45.83333333 11 ConsensusfromContig7452 185 170 SNP 1 G 1 T 83.3 20 24 T 83.33333333 20 ConsensusfromContig7514 78 78 SNP 1 T 2 T/G 62.5/37.5 15/9 24 T 62.5 15 G 37.5 9 ConsensusfromContig7628 192 188 SNP 1 G 1 A 100 24 24 A 100 24 ConsensusfromContig8171 446 438 SNP 1 G 1 T 91.7 22 24 T 91.66666667 22 ConsensusfromContig8811 14 14 SNP 1 A 1 G 100 24 24 G 100 24 ConsensusfromContig8895 41 41 SNP 1 C 1 T 79.2 19 24 T 79.16666667 19 ConsensusfromContig8943 470 469 SNP 1 A 2 A/G 50.0/50.0 12/12 24 A 50 12 G 50 12 ConsensusfromContig8990 314 285 SNP 1 C 2 C/A 58.3/41.7 14/10 24 C 58.33333333 14 A 41.66666667 10 ConsensusfromContig9177 367 280 SNP 1 G 1 A 91.7 22 24 A 91.66666667 22 ConsensusfromContig191 348 312 SNP 1 C 1 T 100 25 25 T 100 25 ConsensusfromContig571 299 215 SNP 1 G 1 T 100 25 25 T 100 25 ConsensusfromContig602 252 243 SNP 1 A 1 C 92 23 25 C 92 23 ConsensusfromContig665 23 18 SNP 1 T 1 C 84 21 25 C 84 21 ConsensusfromContig722 19 19 SNP 1 C 1 T 84 21 25 T 84 21 ConsensusfromContig907 274 217 SNP 1 G 1 A 100 25 25 A 100 25 ConsensusfromContig937 96 89 SNP 1 A 2 G/A 52.0/48.0 13/12 25 G 52 13 A 48 12 ConsensusfromContig1187 751 632 SNP 1 C 2 C/T 52.0/48.0 13/12 25 C 52 13 T 48 12 ConsensusfromContig1525 323 235 SNP 1 C 2 C/T 60.0/40.0 15/10 25 C 60 15 T 40 10 ConsensusfromContig1529 143 109 SNP 1 C 1 G 88 22 25 G 88 22 ConsensusfromContig1651 232 147 SNP 1 G 1 A 100 25 25 A 100 25 ConsensusfromContig2438 511 306 SNP 1 T 1 G 76 19 25 G 76 19 ConsensusfromContig2470 126 90 SNP 1 C 1 T 100 25 25 T 100 25 ConsensusfromContig2759 127 104 SNP 1 T 1 A 100 25 25 A 100 25 ConsensusfromContig4536 59 49 SNP 1 A 1 C 76 19 25 C 76 19 ConsensusfromContig5172 319 272 SNP 1 A 2 G/A 60.0/40.0 15/10 25 G 60 15 A 40 10 ConsensusfromContig5202 47 46 SNP 1 C 1 T 100 25 25 T 100 25 ConsensusfromContig5311 65 60 SNP 1 C 2 C/A 64.0/36.0 16/9 25 C 64 16 A 36 9 ConsensusfromContig5362 681 663 SNP 1 A 2 A/C 56.0/44.0 14/11 25 A 56 14 C 44 11 ConsensusfromContig5808 307 288 SNP 1 C 2 T/C 56.0/44.0 14/11 25 T 56 14 C 44 11 ConsensusfromContig6127 179 148 SNP 1 C 1 T 100 25 25 T 100 25 ConsensusfromContig6263 311 311 SNP 1 C 2 T/C 60.0/40.0 15/10 25 T 60 15 C 40 10 ConsensusfromContig7113 510 400 SNP 1 A 1 C 100 25 25 C 100 25 ConsensusfromContig7246 272 243 SNP 1 C 1 T 100 25 25 T 100 25 ConsensusfromContig7472 378 337 SNP 1 C 1 T 100 25 25 T 100 25 ConsensusfromContig7671 204 197 SNP 1 G 1 A 100 25 25 A 100 25 ConsensusfromContig8155 184 12 SNP 1 G 1 T 100 25 25 T 100 25 ConsensusfromContig8403 628 530 SNP 1 C 1 T 76 19 25 T 76 19 ConsensusfromContig8742 351 331 SNP 1 G 1 T 100 25 25 T 100 25 ConsensusfromContig191 106 70 SNP 1 C 1 T 100 26 26 T 100 26 ConsensusfromContig590 151 133 SNP 1 A 2 A/G 50.0/46.2 13/12 26 A 50 13 G 46.15384615 12 ConsensusfromContig1216 583 490 SNP 1 G 2 G/T 50.0/50.0 13/13 26 G 50 13 T 50 13 ConsensusfromContig1625 124 119 SNP 1 C 1 A 69.2 18 26 A 69.23076923 18 ConsensusfromContig1678 521 521 SNP 1 A 1 T 84.6 22 26 T 84.61538462 22 ConsensusfromContig2177 133 131 SNP 1 T 1 C 96.2 25 26 C 96.15384615 25 ConsensusfromContig2523 186 182 SNP 1 C 1 T 92.3 24 26 T 92.30769231 24 ConsensusfromContig2783 135 135 SNP 1 A 1 G 100 26 26 G 100 26 ConsensusfromContig3011 87 87 SNP 1 G 1 A 96.2 25 26 A 96.15384615 25 ConsensusfromContig3236 67 64 SNP 1 T 1 A 76.9 20 26 A 76.92307692 20 ConsensusfromContig3294 265 235 SNP 1 G 1 T 100 26 26 T 100 26 ConsensusfromContig3356 248 202 SNP 1 T 1 C 76.9 20 26 C 76.92307692 20 ConsensusfromContig4752 221 183 SNP 1 A 1 T 100 26 26 T 100 26 ConsensusfromContig4758 383 301 SNP 1 T 1 C 96.2 25 26 C 96.15384615 25 ConsensusfromContig5890 369 240 SNP 1 C 2 C/T 57.7/42.3 15/11 26 C 57.69230769 15 T 42.30769231 11 ConsensusfromContig6704 238 215 SNP 1 C 2 C/T 61.5/38.5 16/10 26 C 61.53846154 16 T 38.46153846 10 ConsensusfromContig7007 223 215 SNP 1 A 1 G 84.6 22 26 G 84.61538462 22 ConsensusfromContig7322 294 274 SNP 1 C 1 T 100 26 26 T 100 26 ConsensusfromContig7370 85 85 SNP 1 C 2 C/T 53.8/46.2 14/12 26 C 53.84615385 14 T 46.15384615 12 ConsensusfromContig7516 620 583 SNP 1 G 1 A 100 26 26 A 100 26 ConsensusfromContig7810 347 335 SNP 1 T 1 C 100 26 26 C 100 26 ConsensusfromContig8011 602 519 SNP 1 G 1 T 88.5 23 26 T 88.46153846 23 ConsensusfromContig8011 603 520 SNP 1 C 1 G 88.5 23 26 G 88.46153846 23 ConsensusfromContig8075 759 627 SNP 1 A 2 A/G 53.8/46.2 14/12 26 A 53.84615385 14 G 46.15384615 12 ConsensusfromContig8088 87 60 SNP 1 C 1 T 100 26 26 T 100 26 ConsensusfromContig9014 141 138 SNP 1 G 2 G/A 57.7/42.3 15/11 26 G 57.69230769 15 A 42.30769231 11 ConsensusfromContig756 361 335 SNP 1 A 1 G 100 27 27 G 100 27 ConsensusfromContig771 173 166 SNP 1 A 2 A/C 63.0/37.0 17/10 27 A 62.96296296 17 C 37.03703704 10 ConsensusfromContig1759 245 214 SNP 1 G 1 A 66.7 18 27 A 66.66666667 18 ConsensusfromContig2290 250 183 SNP 1 G 2 G/A 59.3/40.7 16/11 27 G 59.25925926 16 A 40.74074074 11 ConsensusfromContig3143 366 343 SNP 1 C 1 T 100 27 27 T 100 27 ConsensusfromContig4539 124 86 SNP 1 A 1 C 100 27 27 C 100 27 ConsensusfromContig5029 241 198 SNP 1 T 2 A/T 59.3/40.7 16/11 27 A 59.25925926 16 T 40.74074074 11 ConsensusfromContig5579 225 178 SNP 1 C 2 C/A 59.3/40.7 16/11 27 C 59.25925926 16 A 40.74074074 11 ConsensusfromContig5617 49 41 SNP 1 C 2 C/T 59.3/40.7 16/11 27 C 59.25925926 16 T 40.74074074 11 ConsensusfromContig6681 172 156 SNP 1 C 2 C/T 63.0/37.0 17/10 27 C 62.96296296 17 T 37.03703704 10 ConsensusfromContig7401 194 162 SNP 1 A 2 G/A 59.3/37.0 16/10 27 G 59.25925926 16 A 37.03703704 10 ConsensusfromContig8113 122 116 SNP 1 A 2 A/G 59.3/40.7 16/11 27 A 59.25925926 16 G 40.74074074 11 ConsensusfromContig8301 550 206 SNP 1 C 1 T 100 27 27 T 100 27 ConsensusfromContig8520 20 20 SNP 1 A 1 C 77.8 21 27 C 77.77777778 21 ConsensusfromContig9033 349 335 SNP 1 A 2 A/T 59.3/40.7 16/11 27 A 59.25925926 16 T 40.74074074 11 ConsensusfromContig655 123 123 SNP 1 T 1 C 100 28 28 C 100 28 ConsensusfromContig1182 177 135 SNP 1 C 2 C/T 60.7/39.3 17/11 28 C 60.71428571 17 T 39.28571429 11 ConsensusfromContig1193 55 43 SNP 1 A 2 A/G 57.1/42.9 16/12 28 A 57.14285714 16 G 42.85714286 12 ConsensusfromContig1337 75 64 SNP 1 A 1 G 100 28 28 G 100 28 ConsensusfromContig1557 322 206 SNP 1 T 2 A/T 53.6/46.4 15/13 28 A 53.57142857 15 T 46.42857143 13 ConsensusfromContig2475 460 448 SNP 1 T 2 G/T 53.6/46.4 15/13 28 G 53.57142857 15 T 46.42857143 13 ConsensusfromContig3326 214 196 SNP 1 G 2 G/A 64.3/35.7 18/10 28 G 64.28571429 18 A 35.71428571 10 ConsensusfromContig3328 157 106 SNP 1 A 1 T 75 21 28 T 75 21 ConsensusfromContig3356 272 226 SNP 1 T 2 C/T 57.1/42.9 16/12 28 C 57.14285714 16 T 42.85714286 12 ConsensusfromContig3468 249 245 SNP 1 T 1 C 100 28 28 C 100 28 ConsensusfromContig3512 270 228 SNP 1 G 1 A 67.9 19 28 A 67.85714286 19 ConsensusfromContig5983 25 13 SNP 1 G 1 A 92.9 26 28 A 92.85714286 26 ConsensusfromContig6360 142 110 SNP 1 A 1 G 100 28 28 G 100 28 ConsensusfromContig6657 297 229 SNP 1 C 1 T 100 28 28 T 100 28 ConsensusfromContig7013 284 284 SNP 1 T 2 T/C 60.7/39.3 17/11 28 T 60.71428571 17 C 39.28571429 11 ConsensusfromContig8171 416 408 SNP 1 A 1 C 100 28 28 C 100 28 ConsensusfromContig8858 299 155 SNP 1 C 2 T/C 53.6/46.4 15/13 28 T 53.57142857 15 C 46.42857143 13 ConsensusfromContig8866 275 268 SNP 1 A 2 G/A 53.6/46.4 15/13 28 G 53.57142857 15 A 46.42857143 13 ConsensusfromContig266 259 254 SNP 1 A 2 G/A 62.1/37.9 18/11 29 G 62.06896552 18 A 37.93103448 11 ConsensusfromContig339 41 41 SNP 1 T 2 C/T 51.7/48.3 15/14 29 C 51.72413793 15 T 48.27586207 14 ConsensusfromContig781 280 252 SNP 1 C 2 C/A 62.1/37.9 18/11 29 C 62.06896552 18 A 37.93103448 11 ConsensusfromContig1714 569 552 SNP 1 A 1 C 75.9 22 29 C 75.86206897 22 ConsensusfromContig1954 77 29 SNP 1 A 1 G 86.2 25 29 G 86.20689655 25 ConsensusfromContig1976 558 476 SNP 1 C 2 C/T 55.2/44.8 16/13 29 C 55.17241379 16 T 44.82758621 13 ConsensusfromContig2048 559 526 SNP 1 A 1 C 100 29 29 C 100 29 ConsensusfromContig2377 404 182 SNP 1 G 1 A 100 29 29 A 100 29 ConsensusfromContig2696 765 732 SNP 1 G 1 T 100 29 29 T 100 29 ConsensusfromContig3085 248 196 SNP 1 C 1 T 100 29 29 T 100 29 ConsensusfromContig3341 345 92 SNP 1 T 2 T/G 51.7/41.4 15/12 29 T 51.72413793 15 G 41.37931034 12 ConsensusfromContig4037 212 212 SNP 1 G 1 A 100 29 29 A 100 29 ConsensusfromContig4272 186 134 SNP 1 C 1 T 100 29 29 T 100 29 ConsensusfromContig4782 85 55 SNP 1 G 1 A 100 29 29 A 100 29 ConsensusfromContig5234 177 145 SNP 1 A 1 G 82.8 24 29 G 82.75862069 24 ConsensusfromContig5894 66 51 SNP 1 A 2 T/A 51.7/48.3 15/14 29 T 51.72413793 15 A 48.27586207 14 ConsensusfromContig6210 234 201 SNP 1 C 1 T 100 29 29 T 100 29 ConsensusfromContig6214 207 198 SNP 1 G 1 T 82.8 24 29 T 82.75862069 24 ConsensusfromContig6330 199 99 SNP 1 A 2 A/G 62.1/37.9 18/11 29 A 62.06896552 18 G 37.93103448 11 ConsensusfromContig6498 158 150 SNP 1 C 1 T 65.5 19 29 T 65.51724138 19 ConsensusfromContig7265 326 326 SNP 1 A 1 G 100 29 29 G 100 29 ConsensusfromContig7492 282 228 SNP 1 A 1 G 100 29 29 G 100 29 ConsensusfromContig8091 255 221 SNP 1 G 2 G/A 62.1/37.9 18/11 29 G 62.06896552 18 A 37.93103448 11 ConsensusfromContig8208 431 410 SNP 1 C 1 T 79.3 23 29 T 79.31034483 23 ConsensusfromContig8899 100 97 SNP 1 G 2 G/A 62.1/37.9 18/11 29 G 62.06896552 18 A 37.93103448 11 ConsensusfromContig481 392 340 SNP 1 G 2 G/A 63.3/36.7 19/11 30 G 63.33333333 19 A 36.66666667 11 ConsensusfromContig579 215 182 SNP 1 C 1 T 100 30 30 T 100 30 ConsensusfromContig1193 163 151 SNP 1 T 1 A 66.7 20 30 A 66.66666667 20 ConsensusfromContig1623 205 205 SNP 1 A 1 G 96.7 29 30 G 96.66666667 29 ConsensusfromContig2005 177 177 SNP 1 T 2 T/G 63.3/36.7 19/11 30 T 63.33333333 19 G 36.66666667 11 ConsensusfromContig2211 218 201 SNP 1 A 2 A/T 53.3/46.7 16/14 30 A 53.33333333 16 T 46.66666667 14 ConsensusfromContig2624 120 90 SNP 1 C 2 C/G 60.0/40.0 18/12 30 C 60 18 G 40 12 ConsensusfromContig2678 214 214 SNP 1 T 1 C 100 30 30 C 100 30 ConsensusfromContig3335 123 107 SNP 1 G 2 A/G 50.0/50.0 15/15 30 A 50 15 G 50 15 ConsensusfromContig3366 177 158 SNP 1 A 2 A/G 50.0/50.0 15/15 30 A 50 15 G 50 15 ConsensusfromContig4493 320 138 SNP 1 A 1 G 100 30 30 G 100 30 ConsensusfromContig4573 166 91 SNP 1 T 2 T/C 53.3/46.7 16/14 30 T 53.33333333 16 C 46.66666667 14 ConsensusfromContig4898 37 37 SNP 1 A 2 A/C 56.7/43.3 17/13 30 A 56.66666667 17 C 43.33333333 13 ConsensusfromContig4898 45 45 SNP 1 C 1 G 100 30 30 G 100 30 ConsensusfromContig4904 411 403 SNP 1 C 2 C/G 53.3/46.7 16/14 30 C 53.33333333 16 G 46.66666667 14 ConsensusfromContig5119 202 172 SNP 1 T 2 G/T 53.3/46.7 16/14 30 G 53.33333333 16 T 46.66666667 14 ConsensusfromContig5219 55 31 SNP 1 C 1 T 66.7 20 30 T 66.66666667 20 ConsensusfromContig5698 80 60 SNP 1 T 2 C/T 53.3/43.3 16/13 30 C 53.33333333 16 T 43.33333333 13 ConsensusfromContig6022 164 133 SNP 1 A 1 C 93.3 28 30 C 93.33333333 28 ConsensusfromContig6086 202 117 SNP 1 T 1 C 83.3 25 30 C 83.33333333 25 ConsensusfromContig7084 73 73 SNP 1 C 1 T 100 30 30 T 100 30 ConsensusfromContig7192 151 22 SNP 1 T 1 C 96.7 29 30 C 96.66666667 29 ConsensusfromContig7259 150 94 SNP 1 C 1 T 83.3 25 30 T 83.33333333 25 ConsensusfromContig7409 87 87 SNP 1 A 1 G 93.3 28 30 G 93.33333333 28 ConsensusfromContig8705 105 74 SNP 1 C 1 T 100 30 30 T 100 30 ConsensusfromContig8705 241 210 SNP 1 A 1 G 96.7 29 30 G 96.66666667 29 ConsensusfromContig8748 41 41 SNP 1 G 2 G/C 53.3/46.7 16/14 30 G 53.33333333 16 C 46.66666667 14 ConsensusfromContig8990 329 300 SNP 1 T 1 C 93.3 28 30 C 93.33333333 28 ConsensusfromContig716 404 372 SNP 1 G 2 G/C 64.5/35.5 20/11 31 G 64.51612903 20 C 35.48387097 11 ConsensusfromContig1418 445 445 SNP 1 C 1 A 71 22 31 A 70.96774194 22 ConsensusfromContig1474 582 520 SNP 1 C 2 C/T 64.5/35.5 20/11 31 C 64.51612903 20 T 35.48387097 11 ConsensusfromContig1976 627 545 SNP 1 C 2 A/C 54.8/45.2 17/14 31 A 54.83870968 17 C 45.16129032 14 ConsensusfromContig2530 597 391 SNP 1 G 1 A 100 31 31 A 100 31 ConsensusfromContig2641 429 257 SNP 1 G 2 G/A 54.8/45.2 17/14 31 G 54.83870968 17 A 45.16129032 14 ConsensusfromContig2759 244 221 SNP 1 G 1 A 80.6 25 31 A 80.64516129 25 ConsensusfromContig3143 194 179 SNP 1 C 2 C/T 64.5/35.5 20/11 31 C 64.51612903 20 T 35.48387097 11 ConsensusfromContig3234 268 252 SNP 1 T 2 T/C 64.5/35.5 20/11 31 T 64.51612903 20 C 35.48387097 11 ConsensusfromContig3296 43 28 SNP 1 T 1 C 100 31 31 C 100 31 ConsensusfromContig4509 111 100 SNP 1 A 2 C/A 61.3/38.7 19/12 31 C 61.29032258 19 A 38.70967742 12 ConsensusfromContig4904 470 462 SNP 1 G 2 A/G 51.6/48.4 16/15 31 A 51.61290323 16 G 48.38709677 15 ConsensusfromContig5263 434 411 SNP 1 A 1 G 77.4 24 31 G 77.41935484 24 ConsensusfromContig5992 108 104 SNP 1 G 1 A 71 22 31 A 70.96774194 22 ConsensusfromContig7179 37 18 SNP 1 C 2 T/C 54.8/45.2 17/14 31 T 54.83870968 17 C 45.16129032 14 ConsensusfromContig7727 533 424 SNP 1 C 1 G 83.9 26 31 G 83.87096774 26 ConsensusfromContig8635 124 124 SNP 1 A 1 G 100 31 31 G 100 31 ConsensusfromContig8895 104 104 SNP 1 A 2 G/A 58.1/38.7 18/12 31 G 58.06451613 18 A 38.70967742 12 ConsensusfromContig451 138 138 SNP 1 G 2 A/G 50.0/50.0 16/16 32 A 50 16 G 50 16 ConsensusfromContig781 279 251 SNP 1 T 1 C 96.9 31 32 C 96.875 31 ConsensusfromContig1132 146 26 SNP 1 G 1 A 87.5 28 32 A 87.5 28 ConsensusfromContig1319 530 491 SNP 1 T 2 T/G 56.2/40.6 18/13 32 T 56.25 18 G 40.625 13 ConsensusfromContig1714 575 558 SNP 1 A 1 G 75 24 32 G 75 24 ConsensusfromContig2314 157 142 SNP 1 C 2 C/A 62.5/37.5 20/12 32 C 62.5 20 A 37.5 12 ConsensusfromContig2701 63 25 SNP 1 T 1 C 100 32 32 C 100 32 ConsensusfromContig3280 59 28 SNP 1 C 2 C/T 50.0/50.0 16/16 32 C 50 16 T 50 16 ConsensusfromContig3326 172 154 SNP 1 A 2 A/C 62.5/37.5 20/12 32 A 62.5 20 C 37.5 12 ConsensusfromContig3335 61 45 SNP 1 G 2 T/G 62.5/37.5 20/12 32 T 62.5 20 G 37.5 12 ConsensusfromContig3680 223 222 SNP 1 A 2 A/C 53.1/46.9 17/15 32 A 53.125 17 C 46.875 15 ConsensusfromContig4152 295 258 SNP 1 C 1 G 81.2 26 32 G 81.25 26 ConsensusfromContig5172 80 33 SNP 1 A 2 A/T 59.4/40.6 19/13 32 A 59.375 19 T 40.625 13 ConsensusfromContig6623 37 28 SNP 1 A 1 G 75 24 32 G 75 24 ConsensusfromContig7514 311 311 SNP 1 A 2 A/G 53.1/46.9 17/15 32 A 53.125 17 G 46.875 15 ConsensusfromContig7670 264 182 SNP 1 A 1 C 87.5 28 32 C 87.5 28 ConsensusfromContig8353 423 153 SNP 1 A 1 G 100 32 32 G 100 32 ConsensusfromContig9002 546 505 SNP 1 T 2 C/T 50.0/50.0 16/16 32 C 50 16 T 50 16 ConsensusfromContig9184 45 45 SNP 1 T 2 T/C 59.4/40.6 19/13 32 T 59.375 19 C 40.625 13 ConsensusfromContig9270 15 8 SNP 1 G 2 G/A 62.5/37.5 20/12 32 G 62.5 20 A 37.5 12 ConsensusfromContig339 44 44 SNP 1 C 2 G/C 54.5/45.5 18/15 33 G 54.54545455 18 C 45.45454545 15 ConsensusfromContig722 43 43 SNP 1 C 1 T 100 33 33 T 100 33 ConsensusfromContig771 315 308 SNP 1 C 2 T/C 54.5/45.5 18/15 33 T 54.54545455 18 C 45.45454545 15 ConsensusfromContig2177 217 206 SNP 1 T 1 C 75.8 25 33 C 75.75757576 25 ConsensusfromContig2748 18 6 SNP 1 C 1 T 97 32 33 T 96.96969697 32 ConsensusfromContig3313 1246 776 SNP 1 A 1 T 75.8 25 33 T 75.75757576 25 ConsensusfromContig5172 206 159 SNP 1 C 2 C/G 51.5/48.5 17/16 33 C 51.51515152 17 G 48.48484848 16 ConsensusfromContig7084 71 71 SNP 1 C 1 A 97 32 33 A 96.96969697 32 ConsensusfromContig7456 80 80 SNP 1 A 2 A/G 63.6/36.4 21/12 33 A 63.63636364 21 G 36.36363636 12 ConsensusfromContig7516 632 595 SNP 1 N 1 A 100 33 33 A 100 33 ConsensusfromContig7694 44 44 SNP 1 A 2 A/G 54.5/45.5 18/15 33 A 54.54545455 18 G 45.45454545 15 ConsensusfromContig8145 381 375 SNP 1 G 1 A 97 32 33 A 96.96969697 32 ConsensusfromContig8475 183 139 SNP 1 T 2 T/C 60.6/39.4 20/13 33 T 60.60606061 20 C 39.39393939 13 ConsensusfromContig8645 185 149 SNP 1 G 1 T 97 32 33 T 96.96969697 32 ConsensusfromContig628 159 152 SNP 1 C 1 T 100 34 34 T 100 34 ConsensusfromContig1172 188 171 SNP 1 T 2 T/C 61.8/38.2 21/13 34 T 61.76470588 21 C 38.23529412 13 ConsensusfromContig2050 311 291 SNP 1 G 2 A/G 52.9/47.1 18/16 34 A 52.94117647 18 G 47.05882353 16 ConsensusfromContig2152 220 197 SNP 1 C 2 C/T 52.9/47.1 18/16 34 C 52.94117647 18 T 47.05882353 16 ConsensusfromContig2713 78 44 SNP 1 A 1 G 94.1 32 34 G 94.11764706 32 ConsensusfromContig3189 561 491 SNP 1 A 1 G 100 34 34 G 100 34 ConsensusfromContig3440 511 507 SNP 1 C 1 T 100 34 34 T 100 34 ConsensusfromContig3621 169 169 SNP 1 G 2 A/G 52.9/47.1 18/16 34 A 52.94117647 18 G 47.05882353 16 ConsensusfromContig4049 484 317 SNP 1 C 2 C/G 52.9/47.1 18/16 34 C 52.94117647 18 G 47.05882353 16 ConsensusfromContig5234 213 181 SNP 1 C 1 A 82.4 28 34 A 82.35294118 28 ConsensusfromContig5636 266 266 SNP 1 A 1 G 76.5 26 34 G 76.47058824 26 ConsensusfromContig6304 95 69 SNP 1 G 2 G/A 61.8/38.2 21/13 34 G 61.76470588 21 A 38.23529412 13 ConsensusfromContig7670 263 181 SNP 1 A 1 G 85.3 29 34 G 85.29411765 29 ConsensusfromContig8686 466 405 SNP 1 A 2 G/A 52.9/44.1 18/15 34 G 52.94117647 18 A 44.11764706 15 ConsensusfromContig8698 375 343 SNP 1 A 1 G 100 34 34 G 100 34 ConsensusfromContig8990 267 238 SNP 1 G 1 T 76.5 26 34 T 76.47058824 26 ConsensusfromContig8993 217 96 SNP 1 C 1 T 100 34 34 T 100 34 ConsensusfromContig36 325 286 SNP 1 C 2 A/C 51.4/48.6 18/17 35 A 51.42857143 18 C 48.57142857 17 ConsensusfromContig101 135 135 SNP 1 A 1 G 100 35 35 G 100 35 ConsensusfromContig432 13 13 SNP 1 T 2 T/C 54.3/45.7 19/16 35 T 54.28571429 19 C 45.71428571 16 ConsensusfromContig584 243 223 SNP 1 G 1 A 82.9 29 35 A 82.85714286 29 ConsensusfromContig714 249 227 SNP 1 A 1 G 100 35 35 G 100 35 ConsensusfromContig1451 538 507 SNP 1 T 2 T/C 60.0/40.0 21/14 35 T 60 21 C 40 14 ConsensusfromContig1665 781 677 SNP 1 A 1 G 100 35 35 G 100 35 ConsensusfromContig1948 169 159 SNP 1 C 1 T 100 35 35 T 100 35 ConsensusfromContig2295 429 429 SNP 1 C 1 T 100 35 35 T 100 35 ConsensusfromContig2537 136 131 SNP 1 C 2 T/C 51.4/48.6 18/17 35 T 51.42857143 18 C 48.57142857 17 ConsensusfromContig3039 229 219 SNP 1 T 2 C/T 51.4/48.6 18/17 35 C 51.42857143 18 T 48.57142857 17 ConsensusfromContig3187 467 365 SNP 1 T 1 C 65.7 23 35 C 65.71428571 23 ConsensusfromContig3373 185 148 SNP 1 G 1 C 65.7 23 35 C 65.71428571 23 ConsensusfromContig3905 223 202 SNP 1 T 2 G/T 60.0/40.0 21/14 35 G 60 21 T 40 14 ConsensusfromContig5287 162 162 SNP 1 A 2 A/T 57.1/42.9 20/15 35 A 57.14285714 20 T 42.85714286 15 ConsensusfromContig7259 175 119 SNP 1 A 1 G 100 35 35 G 100 35 ConsensusfromContig7411 33 33 SNP 1 G 2 G/A 62.9/37.1 22/13 35 G 62.85714286 22 A 37.14285714 13 ConsensusfromContig8003 321 306 SNP 1 A 2 T/A 60.0/40.0 21/14 35 T 60 21 A 40 14 ConsensusfromContig8087 152 126 SNP 1 C 1 G 82.9 29 35 G 82.85714286 29 ConsensusfromContig8948 471 465 SNP 1 A 1 C 100 35 35 C 100 35 ConsensusfromContig9270 84 77 SNP 1 A 2 G/A 57.1/42.9 20/15 35 G 57.14285714 20 A 42.85714286 15 ConsensusfromContig270 233 218 SNP 1 C 1 T 100 36 36 T 100 36 ConsensusfromContig292 130 130 SNP 1 T 2 T/A 55.6/44.4 20/16 36 T 55.55555556 20 A 44.44444444 16 ConsensusfromContig786 331 259 SNP 1 T 1 C 91.7 33 36 C 91.66666667 33 ConsensusfromContig1625 151 146 SNP 1 G 2 C/G 63.9/36.1 23/13 36 C 63.88888889 23 G 36.11111111 13 ConsensusfromContig1714 616 599 SNP 1 C 1 T 97.2 35 36 T 97.22222222 35 ConsensusfromContig2136 141 122 SNP 1 T 2 T/C 55.6/44.4 20/16 36 T 55.55555556 20 C 44.44444444 16 ConsensusfromContig3130 191 191 SNP 1 A 1 G 72.2 26 36 G 72.22222222 26 ConsensusfromContig3377 595 558 SNP 1 G 2 A/G 50.0/50.0 18/18 36 A 50 18 G 50 18 ConsensusfromContig4114 295 278 SNP 1 C 1 T 72.2 26 36 T 72.22222222 26 ConsensusfromContig4332 131 101 SNP 1 A 2 A/G 50.0/50.0 18/18 36 A 50 18 G 50 18 ConsensusfromContig5943 265 265 SNP 1 A 1 T 86.1 31 36 T 86.11111111 31 ConsensusfromContig6681 112 96 SNP 1 G 1 T 75 27 36 T 75 27 ConsensusfromContig7986 302 298 SNP 1 C 1 T 100 36 36 T 100 36 ConsensusfromContig8064 23 21 SNP 1 C 2 G/C 63.9/36.1 23/13 36 G 63.88888889 23 C 36.11111111 13 ConsensusfromContig8403 764 658 SNP 1 C 1 T 86.1 31 36 T 86.11111111 31 ConsensusfromContig9000 377 375 SNP 1 C 1 T 100 36 36 T 100 36 ConsensusfromContig732 191 175 SNP 1 C 1 G 100 37 37 G 100 37 ConsensusfromContig771 399 392 SNP 1 G 2 G/C 51.4/48.6 19/18 37 G 51.35135135 19 C 48.64864865 18 ConsensusfromContig1418 55 55 SNP 1 G 2 A/G 59.5/40.5 22/15 37 A 59.45945946 22 G 40.54054054 15 ConsensusfromContig3007 289 251 SNP 1 T 2 C/T 64.9/35.1 24/13 37 C 64.86486486 24 T 35.13513514 13 ConsensusfromContig3110 388 282 SNP 1 A 2 A/G 64.9/35.1 24/13 37 A 64.86486486 24 G 35.13513514 13 ConsensusfromContig3234 254 238 SNP 1 A 2 G/A 59.5/40.5 22/15 37 G 59.45945946 22 A 40.54054054 15 ConsensusfromContig3308 142 50 SNP 1 G 1 A 97.3 36 37 A 97.2972973 36 ConsensusfromContig3344 318 310 SNP 1 T 2 T/C 54.1/45.9 20/17 37 T 54.05405405 20 C 45.94594595 17 ConsensusfromContig3451 186 42 SNP 1 C 1 T 70.3 26 37 T 70.27027027 26 ConsensusfromContig3529 292 286 SNP 1 C 2 C/A 62.2/37.8 23/14 37 C 62.16216216 23 A 37.83783784 14 ConsensusfromContig5205 236 220 SNP 1 C 2 C/A 56.8/43.2 21/16 37 C 56.75675676 21 A 43.24324324 16 ConsensusfromContig5985 322 279 SNP 1 A 1 G 86.5 32 37 G 86.48648649 32 ConsensusfromContig7192 185 56 SNP 1 G 2 C/G 64.9/35.1 24/13 37 C 64.86486486 24 G 35.13513514 13 ConsensusfromContig7278 163 132 SNP 1 C 2 C/T 59.5/40.5 22/15 37 C 59.45945946 22 T 40.54054054 15 ConsensusfromContig7740 458 341 SNP 1 A 2 G/A 51.4/48.6 19/18 37 G 51.35135135 19 A 48.64864865 18 ConsensusfromContig8043 196 93 SNP 1 A 1 G 97.3 36 37 G 97.2972973 36 ConsensusfromContig8730 119 98 SNP 1 G 1 A 67.6 25 37 A 67.56756757 25 ConsensusfromContig8979 297 292 SNP 1 G 2 A/G 59.5/40.5 22/15 37 A 59.45945946 22 G 40.54054054 15 ConsensusfromContig8990 113 97 SNP 1 C 1 T 89.2 33 37 T 89.18918919 33 ConsensusfromContig9002 534 493 SNP 1 T 2 T/G 54.1/45.9 20/17 37 T 54.05405405 20 G 45.94594595 17 ConsensusfromContig412 205 195 SNP 1 G 1 T 100 38 38 T 100 38 ConsensusfromContig2211 245 228 SNP 1 A 1 G 84.2 32 38 G 84.21052632 32 ConsensusfromContig4332 183 153 SNP 1 A 2 C/A 60.5/39.5 23/15 38 C 60.52631579 23 A 39.47368421 15 ConsensusfromContig6498 110 102 SNP 1 C 1 A 71.1 27 38 A 71.05263158 27 ConsensusfromContig8904 37 8 SNP 1 A 2 C/A 55.3/44.7 21/17 38 C 55.26315789 21 A 44.73684211 17 ConsensusfromContig8969 172 172 SNP 1 T 1 C 84.2 32 38 C 84.21052632 32 ConsensusfromContig9100 305 191 SNP 1 T 1 G 73.7 28 38 G 73.68421053 28 ConsensusfromContig387 53 33 SNP 1 C 1 T 100 39 39 T 100 39 ConsensusfromContig508 141 93 SNP 1 A 1 G 69.2 27 39 G 69.23076923 27 ConsensusfromContig665 45 40 SNP 1 A 2 G/A 61.5/38.5 24/15 39 G 61.53846154 24 A 38.46153846 15 ConsensusfromContig672 153 133 SNP 1 A 2 A/G 51.3/48.7 20/19 39 A 51.28205128 20 G 48.71794872 19 ConsensusfromContig1783 47 25 SNP 1 G 1 T 74.4 29 39 T 74.35897436 29 ConsensusfromContig3117 626 580 SNP 1 G 1 A 100 39 39 A 100 39 ConsensusfromContig4332 182 152 SNP 1 C 2 T/C 61.5/38.5 24/15 39 T 61.53846154 24 C 38.46153846 15 ConsensusfromContig4415 165 128 SNP 1 A 1 T 94.9 37 39 T 94.87179487 37 ConsensusfromContig4764 44 26 SNP 1 T 1 G 94.9 37 39 G 94.87179487 37 ConsensusfromContig4903 472 472 SNP 1 G 1 A 100 39 39 A 100 39 ConsensusfromContig6153 203 90 SNP 1 A 1 T 100 39 39 T 100 39 ConsensusfromContig6623 536 475 SNP 1 C 2 C/T 51.3/48.7 20/19 39 C 51.28205128 20 T 48.71794872 19 ConsensusfromContig7409 46 46 SNP 1 A 1 C 100 39 39 C 100 39 ConsensusfromContig8191 612 279 SNP 1 A 1 C 69.2 27 39 C 69.23076923 27 ConsensusfromContig8635 128 128 SNP 1 A 2 A/G 56.4/43.6 22/17 39 A 56.41025641 22 G 43.58974359 17 ConsensusfromContig205 95 95 SNP 1 T 2 C/T 62.5/37.5 25/15 40 C 62.5 25 T 37.5 15 ConsensusfromContig269 32 31 SNP 1 G 2 A/G 57.5/42.5 23/17 40 A 57.5 23 G 42.5 17 ConsensusfromContig660 36 7 SNP 1 C 1 T 72.5 29 40 T 72.5 29 ConsensusfromContig1193 298 286 SNP 1 T 2 C/T 60.0/40.0 24/16 40 C 60 24 T 40 16 ConsensusfromContig3394 45 44 SNP 1 C 2 C/T 65.0/35.0 26/14 40 C 65 26 T 35 14 ConsensusfromContig4114 291 274 SNP 1 A 1 T 70 28 40 T 70 28 ConsensusfromContig5975 35 26 SNP 1 G 2 G/A 52.5/47.5 21/19 40 G 52.5 21 A 47.5 19 ConsensusfromContig6424 142 29 SNP 1 T 2 T/G 62.5/35.0 25/14 40 T 62.5 25 G 35 14 ConsensusfromContig7670 173 91 SNP 1 G 1 T 70 28 40 T 70 28 ConsensusfromContig8640 14 14 SNP 1 C 2 C/G 65.0/35.0 26/14 40 C 65 26 G 35 14 ConsensusfromContig8920 199 66 SNP 1 G 2 C/G 55.0/45.0 22/18 40 C 55 22 G 45 18 ConsensusfromContig773 221 190 SNP 1 G 2 A/G 61.0/39.0 25/16 41 A 60.97560976 25 G 39.02439024 16 ConsensusfromContig1172 654 637 SNP 1 G 2 G/T 61.0/39.0 25/16 41 G 60.97560976 25 T 39.02439024 16 ConsensusfromContig2483 28 28 SNP 1 A 1 G 100 41 41 G 100 41 ConsensusfromContig2658 86 74 SNP 1 G 2 A/G 63.4/36.6 26/15 41 A 63.41463415 26 G 36.58536585 15 ConsensusfromContig2798 335 283 SNP 1 G 2 A/G 56.1/43.9 23/18 41 A 56.09756098 23 G 43.90243902 18 ConsensusfromContig3389 78 78 SNP 1 C 1 T 68.3 28 41 T 68.29268293 28 ConsensusfromContig5734 437 421 SNP 1 C 1 T 100 41 41 T 100 41 ConsensusfromContig5877 111 109 SNP 1 A 1 G 100 41 41 G 100 41 ConsensusfromContig6010 43 43 SNP 1 G 1 A 97.6 40 41 A 97.56097561 40 ConsensusfromContig6385 26 26 SNP 1 A 2 A/G 51.2/48.8 21/20 41 A 51.2195122 21 G 48.7804878 20 ConsensusfromContig6481 189 189 SNP 1 A 1 G 97.6 40 41 G 97.56097561 40 ConsensusfromContig7179 299 274 SNP 1 A 2 A/C 51.2/48.8 21/20 41 A 51.2195122 21 C 48.7804878 20 ConsensusfromContig8639 243 209 SNP 1 C 1 T 73.2 30 41 T 73.17073171 30 ConsensusfromContig8990 272 243 SNP 1 C 1 T 70.7 29 41 T 70.73170732 29 ConsensusfromContig612 192 152 SNP 1 A 2 A/G 59.5/40.5 25/17 42 A 59.52380952 25 G 40.47619048 17 ConsensusfromContig2211 203 186 SNP 1 G 2 T/G 59.5/40.5 25/17 42 T 59.52380952 25 G 40.47619048 17 ConsensusfromContig2681 260 161 SNP 1 C 1 T 71.4 30 42 T 71.42857143 30 ConsensusfromContig3038 197 197 SNP 1 A 2 A/G 57.1/42.9 24/18 42 A 57.14285714 24 G 42.85714286 18 ConsensusfromContig3039 245 235 SNP 1 A 1 C 66.7 28 42 C 66.66666667 28 ConsensusfromContig4114 397 380 SNP 1 C 2 C/T 54.8/45.2 23/19 42 C 54.76190476 23 T 45.23809524 19 ConsensusfromContig4903 453 453 SNP 1 G 1 A 100 42 42 A 100 42 ConsensusfromContig6183 461 442 SNP 1 A 1 G 97.6 41 42 G 97.61904762 41 ConsensusfromContig6565 277 239 SNP 1 G 2 G/T 64.3/35.7 27/15 42 G 64.28571429 27 T 35.71428571 15 ConsensusfromContig7392 166 66 SNP 1 A 1 G 69 29 42 G 69.04761905 29 ConsensusfromContig8886 328 274 SNP 1 A 1 G 69 29 42 G 69.04761905 29 ConsensusfromContig740 164 46 SNP 1 C 1 T 100 43 43 T 100 43 ConsensusfromContig1932 148 134 SNP 1 C 2 C/T 55.8/44.2 24/19 43 C 55.81395349 24 T 44.18604651 19 ConsensusfromContig2655 58 25 SNP 1 T 2 T/C 55.8/44.2 24/19 43 T 55.81395349 24 C 44.18604651 19 ConsensusfromContig3229 21 6 SNP 1 G 1 A 100 43 43 A 100 43 ConsensusfromContig3356 302 256 SNP 1 C 2 C/T 60.5/39.5 26/17 43 C 60.46511628 26 T 39.53488372 17 ConsensusfromContig3451 187 43 SNP 1 C 1 T 100 43 43 T 100 43 ConsensusfromContig4152 223 186 SNP 1 T 2 T/C 60.5/39.5 26/17 43 T 60.46511628 26 C 39.53488372 17 ConsensusfromContig4799 288 274 SNP 1 T 2 T/C 62.8/37.2 27/16 43 T 62.79069767 27 C 37.20930233 16 ConsensusfromContig5019 166 143 SNP 1 C 2 C/G 58.1/41.9 25/18 43 C 58.13953488 25 G 41.86046512 18 ConsensusfromContig5511 265 243 SNP 1 C 1 T 100 43 43 T 100 43 ConsensusfromContig5812 21 21 SNP 1 T 2 T/A 62.8/37.2 27/16 43 T 62.79069767 27 A 37.20930233 16 ConsensusfromContig6704 159 136 SNP 1 T 2 G/T 53.5/46.5 23/20 43 G 53.48837209 23 T 46.51162791 20 ConsensusfromContig7081 74 48 SNP 1 A 1 G 100 43 43 G 100 43 ConsensusfromContig7670 185 103 SNP 1 C 1 T 74.4 32 43 T 74.41860465 32 ConsensusfromContig7875 505 456 SNP 1 C 1 G 72.1 31 43 G 72.09302326 31 ConsensusfromContig8207 65 59 SNP 1 A 2 G/A 62.8/37.2 27/16 43 G 62.79069767 27 A 37.20930233 16 ConsensusfromContig244 193 171 SNP 1 A 2 A/T 54.5/45.5 24/20 44 A 54.54545455 24 T 45.45454545 20 ConsensusfromContig692 162 162 SNP 1 T 2 T/C 61.4/38.6 27/17 44 T 61.36363636 27 C 38.63636364 17 ConsensusfromContig738 248 188 SNP 1 A 1 T 100 44 44 T 100 44 ConsensusfromContig1734 60 49 SNP 1 C 1 A 75 33 44 A 75 33 ConsensusfromContig3038 160 160 SNP 1 T 2 T/C 63.6/36.4 28/16 44 T 63.63636364 28 C 36.36363636 16 ConsensusfromContig3344 72 64 SNP 1 G 2 G/T 59.1/40.9 26/18 44 G 59.09090909 26 T 40.90909091 18 ConsensusfromContig5816 10 10 SNP 1 A 2 A/C 61.4/38.6 27/17 44 A 61.36363636 27 C 38.63636364 17 ConsensusfromContig9300 235 137 SNP 1 C 2 G/C 63.6/36.4 28/16 44 G 63.63636364 28 C 36.36363636 16 ConsensusfromContig1193 531 513 SNP 1 T 2 T/A 53.3/46.7 24/21 45 T 53.33333333 24 A 46.66666667 21 ConsensusfromContig2045 229 211 SNP 1 C 1 A 100 45 45 A 100 45 ConsensusfromContig2641 164 49 SNP 1 T 1 G 68.9 31 45 G 68.88888889 31 ConsensusfromContig3229 22 7 SNP 1 T 1 C 100 45 45 C 100 45 ConsensusfromContig3389 60 60 SNP 1 G 2 G/A 51.1/48.9 23/22 45 G 51.11111111 23 A 48.88888889 22 ConsensusfromContig3553 71 71 SNP 1 A 1 G 100 45 45 G 100 45 ConsensusfromContig4019 390 390 SNP 1 C 1 T 100 45 45 T 100 45 ConsensusfromContig4037 256 256 SNP 1 A 2 A/G 53.3/44.4 24/20 45 A 53.33333333 24 G 44.44444444 20 ConsensusfromContig5172 201 154 SNP 1 A 2 A/G 53.3/46.7 24/21 45 A 53.33333333 24 G 46.66666667 21 ConsensusfromContig6529 135 135 SNP 1 G 1 T 97.8 44 45 T 97.77777778 44 ConsensusfromContig7810 50 38 SNP 1 T 1 G 71.1 32 45 G 71.11111111 32 ConsensusfromContig8869 62 45 SNP 1 G 1 A 100 45 45 A 100 45 ConsensusfromContig36 227 188 SNP 1 A 2 A/T 50.0/50.0 23/23 46 A 50 23 T 50 23 ConsensusfromContig244 190 168 SNP 1 T 2 C/T 50.0/50.0 23/23 46 C 50 23 T 50 23 ConsensusfromContig1182 430 378 SNP 1 T 2 T/C 58.7/41.3 27/19 46 T 58.69565217 27 C 41.30434783 19 ConsensusfromContig2177 91 89 SNP 1 C 1 T 65.2 30 46 T 65.2173913 30 ConsensusfromContig3366 208 189 SNP 1 A 2 C/A 52.2/47.8 24/22 46 C 52.17391304 24 A 47.82608696 22 ConsensusfromContig3872 390 331 SNP 1 C 1 T 100 46 46 T 100 46 ConsensusfromContig4332 60 30 SNP 1 C 2 C/T 50.0/50.0 23/23 46 C 50 23 T 50 23 ConsensusfromContig5617 247 239 SNP 1 T 2 C/T 60.9/39.1 28/18 46 C 60.86956522 28 T 39.13043478 18 ConsensusfromContig6557 272 258 SNP 1 T 1 C 97.8 45 46 C 97.82608696 45 ConsensusfromContig7179 192 173 SNP 1 T 2 G/T 50.0/50.0 23/23 46 G 50 23 T 50 23 ConsensusfromContig8358 98 75 SNP 1 A 2 A/G 54.3/45.7 25/21 46 A 54.34782609 25 G 45.65217391 21 ConsensusfromContig8620 228 200 SNP 1 A 2 T/A 60.9/39.1 28/18 46 T 60.86956522 28 A 39.13043478 18 ConsensusfromContig665 64 59 SNP 1 T 2 C/T 53.2/46.8 25/22 47 C 53.19148936 25 T 46.80851064 22 ConsensusfromContig2108 191 142 SNP 1 T 1 C 100 47 47 C 100 47 ConsensusfromContig2259 166 166 SNP 1 G 2 G/T 61.7/38.3 29/18 47 G 61.70212766 29 T 38.29787234 18 ConsensusfromContig3007 274 236 SNP 1 T 2 T/C 57.4/42.6 27/20 47 T 57.44680851 27 C 42.55319149 20 ConsensusfromContig3014 38 15 SNP 1 T 2 C/T 51.1/48.9 24/23 47 C 51.06382979 24 T 48.93617021 23 ConsensusfromContig3272 271 260 SNP 1 T 2 C/T 53.2/44.7 25/21 47 C 53.19148936 25 T 44.68085106 21 ConsensusfromContig4114 392 375 SNP 1 A 2 G/A 53.2/46.8 25/22 47 G 53.19148936 25 A 46.80851064 22 ConsensusfromContig5251 118 118 SNP 1 T 1 C 100 47 47 C 100 47 ConsensusfromContig5636 249 249 SNP 1 A 1 T 80.9 38 47 T 80.85106383 38 ConsensusfromContig6263 356 356 SNP 1 C 1 T 76.6 36 47 T 76.59574468 36 ConsensusfromContig6304 146 120 SNP 1 G 2 G/A 63.8/36.2 30/17 47 G 63.82978723 30 A 36.17021277 17 ConsensusfromContig8624 74 67 SNP 1 A 2 A/T 51.1/48.9 24/23 47 A 51.06382979 24 T 48.93617021 23 ConsensusfromContig261 121 121 SNP 1 C 1 T 97.9 47 48 T 97.91666667 47 ConsensusfromContig771 391 384 SNP 1 T 2 T/C 58.3/41.7 28/20 48 T 58.33333333 28 C 41.66666667 20 ConsensusfromContig1932 136 122 SNP 1 G 2 A/G 56.2/43.8 27/21 48 A 56.25 27 G 43.75 21 ConsensusfromContig2108 200 151 SNP 1 C 2 G/C 50.0/47.9 24/23 48 G 50 24 C 47.91666667 23 ConsensusfromContig3219 185 172 SNP 1 C 2 C/A 39.6/35.4 19/17 48 C 39.58333333 19 A 35.41666667 17 ConsensusfromContig5091 474 439 SNP 1 C 2 T/C 58.3/41.7 28/20 48 T 58.33333333 28 C 41.66666667 20 ConsensusfromContig6303 47 47 SNP 1 G 2 C/G 58.3/41.7 28/20 48 C 58.33333333 28 G 41.66666667 20 ConsensusfromContig7694 177 177 SNP 1 G 1 A 66.7 32 48 A 66.66666667 32 ConsensusfromContig7710 40 40 SNP 1 A 1 T 100 48 48 T 100 48 ConsensusfromContig8811 90 90 SNP 1 G 2 G/A 58.3/41.7 28/20 48 G 58.33333333 28 A 41.66666667 20 ConsensusfromContig2024 434 434 SNP 1 G 1 A 100 49 49 A 100 49 ConsensusfromContig3036 185 155 SNP 1 A 1 G 65.3 32 49 G 65.30612245 32 ConsensusfromContig3344 306 298 SNP 1 T 2 T/C 61.2/38.8 30/19 49 T 61.2244898 30 C 38.7755102 19 ConsensusfromContig5975 21 12 SNP 1 A 2 G/A 63.3/36.7 31/18 49 G 63.26530612 31 A 36.73469388 18 ConsensusfromContig6704 152 129 SNP 1 A 2 T/A 51.0/49.0 25/24 49 T 51.02040816 25 A 48.97959184 24 ConsensusfromContig7409 101 101 SNP 1 T 1 A 95.9 47 49 A 95.91836735 47 ConsensusfromContig7610 285 205 SNP 1 A 1 G 100 49 49 G 100 49 ConsensusfromContig8171 146 138 SNP 1 C 1 A 73.5 36 49 A 73.46938776 36 ConsensusfromContig8218 299 240 SNP 1 C 1 A 100 49 49 A 100 49 ConsensusfromContig8412 486 477 SNP 1 C 2 C/T 59.2/40.8 29/20 49 C 59.18367347 29 T 40.81632653 20 ConsensusfromContig8825 42 42 SNP 1 C 2 C/T 49.0/38.8 24/19 49 C 48.97959184 24 T 38.7755102 19 ConsensusfromContig832 440 405 SNP 1 N 1 A 100 50 50 A 100 50 ConsensusfromContig3280 132 101 SNP 1 C 1 T 100 50 50 T 100 50 ConsensusfromContig3880 276 42 SNP 1 T 1 C 100 50 50 C 100 50 ConsensusfromContig4846 8 8 SNP 1 C 2 C/T 60.0/40.0 30/20 50 C 60 30 T 40 20 ConsensusfromContig6041 13 6 SNP 1 T 1 C 100 50 50 C 100 50 ConsensusfromContig6611 98 60 SNP 1 C 1 T 100 50 50 T 100 50 ConsensusfromContig7152 106 91 SNP 1 C 1 T 100 50 50 T 100 50 ConsensusfromContig9108 331 164 SNP 1 A 1 G 98 49 50 G 98 49 ConsensusfromContig1418 488 488 SNP 1 T 1 G 68.6 35 51 G 68.62745098 35 ConsensusfromContig1428 150 148 SNP 1 T 1 C 98 50 51 C 98.03921569 50 ConsensusfromContig2364 311 250 SNP 1 T 1 A 90.2 46 51 A 90.19607843 46 ConsensusfromContig3389 24 24 SNP 1 C 1 A 68.6 35 51 A 68.62745098 35 ConsensusfromContig4037 280 280 SNP 1 G 2 T/G 56.9/43.1 29/22 51 T 56.8627451 29 G 43.1372549 22 ConsensusfromContig4573 456 381 SNP 1 C 1 T 100 51 51 T 100 51 ConsensusfromContig5544 620 96 SNP 1 C 1 T 96.1 49 51 T 96.07843137 49 ConsensusfromContig6658 149 141 SNP 1 A 1 G 100 51 51 G 100 51 ConsensusfromContig7048 142 136 SNP 1 T 2 T/C 60.8/39.2 31/20 51 T 60.78431373 31 C 39.21568627 20 ConsensusfromContig7295 82 56 SNP 1 C 1 G 74.5 38 51 G 74.50980392 38 ConsensusfromContig8640 188 188 SNP 1 A 2 G/A 60.8/39.2 31/20 51 G 60.78431373 31 A 39.21568627 20 ConsensusfromContig36 228 189 SNP 1 A 2 A/C 51.9/48.1 27/25 52 A 51.92307692 27 C 48.07692308 25 ConsensusfromContig781 256 228 SNP 1 T 2 C/T 53.8/46.2 28/24 52 C 53.84615385 28 T 46.15384615 24 ConsensusfromContig1182 373 321 SNP 1 T 1 C 73.1 38 52 C 73.07692308 38 ConsensusfromContig1193 338 326 SNP 1 C 2 C/A 55.8/44.2 29/23 52 C 55.76923077 29 A 44.23076923 23 ConsensusfromContig3219 75 62 SNP 1 C 2 C/A 61.5/38.5 32/20 52 C 61.53846154 32 A 38.46153846 20 ConsensusfromContig3280 305 265 SNP 1 A 2 C/A 57.7/42.3 30/22 52 C 57.69230769 30 A 42.30769231 22 ConsensusfromContig3377 457 420 SNP 1 C 2 T/C 61.5/38.5 32/20 52 T 61.53846154 32 C 38.46153846 20 ConsensusfromContig3943 296 286 SNP 1 C 1 T 100 52 52 T 100 52 ConsensusfromContig6258 386 386 SNP 1 C 1 T 82.7 43 52 T 82.69230769 43 ConsensusfromContig7048 365 359 SNP 1 C 2 C/A 63.5/36.5 33/19 52 C 63.46153846 33 A 36.53846154 19 ConsensusfromContig407 52 52 SNP 1 T 1 C 79.2 42 53 C 79.24528302 42 ConsensusfromContig602 186 177 SNP 1 G 1 A 69.8 37 53 A 69.81132075 37 ConsensusfromContig607 203 126 SNP 1 C 1 T 90.6 48 53 T 90.56603774 48 ConsensusfromContig1529 111 77 SNP 1 C 1 T 100 53 53 T 100 53 ConsensusfromContig2001 506 466 SNP 1 C 1 T 100 53 53 T 100 53 ConsensusfromContig2177 97 95 SNP 1 C 1 T 73.6 39 53 T 73.58490566 39 ConsensusfromContig2672 163 133 SNP 1 T 1 A 100 53 53 A 100 53 ConsensusfromContig3360 369 369 SNP 1 T 2 T/G 54.7/45.3 29/24 53 T 54.71698113 29 G 45.28301887 24 ConsensusfromContig5172 329 282 SNP 1 C 1 A 67.9 36 53 A 67.9245283 36 ConsensusfromContig5700 42 42 SNP 1 C 1 T 96.2 51 53 T 96.22641509 51 ConsensusfromContig5901 143 143 SNP 1 G 1 T 98.1 52 53 T 98.11320755 52 ConsensusfromContig6483 169 169 SNP 1 G 1 A 100 53 53 A 100 53 ConsensusfromContig6570 106 106 SNP 1 C 2 T/C 50.9/49.1 27/26 53 T 50.94339623 27 C 49.05660377 26 ConsensusfromContig7425 214 214 SNP 1 C 2 C/G 64.2/35.8 34/19 53 C 64.1509434 34 G 35.8490566 19 ConsensusfromContig8075 753 621 SNP 1 C 1 A 69.8 37 53 A 69.81132075 37 ConsensusfromContig569 44 27 SNP 1 C 1 T 98.1 53 54 T 98.14814815 53 ConsensusfromContig771 177 170 SNP 1 G 2 A/G 50.0/50.0 27/27 54 A 50 27 G 50 27 ConsensusfromContig1418 486 486 SNP 1 A 1 T 68.5 37 54 T 68.51851852 37 ConsensusfromContig2005 60 60 SNP 1 C 2 T/C 59.3/40.7 32/22 54 T 59.25925926 32 C 40.74074074 22 ConsensusfromContig2514 107 104 SNP 1 C 2 C/G 61.1/38.9 33/21 54 C 61.11111111 33 G 38.88888889 21 ConsensusfromContig3270 538 449 SNP 1 A 1 G 90.7 49 54 G 90.74074074 49 ConsensusfromContig4203 184 63 SNP 1 A 1 G 100 54 54 G 100 54 ConsensusfromContig8064 41 39 SNP 1 A 2 A/G 57.4/42.6 31/23 54 A 57.40740741 31 G 42.59259259 23 ConsensusfromContig8573 99 97 SNP 1 A 2 G/A 59.3/40.7 32/22 54 G 59.25925926 32 A 40.74074074 22 ConsensusfromContig1234 136 128 SNP 1 C 2 T/C 63.6/36.4 35/20 55 T 63.63636364 35 C 36.36363636 20 ConsensusfromContig1647 73 72 SNP 1 G 2 A/G 63.6/36.4 35/20 55 A 63.63636364 35 G 36.36363636 20 ConsensusfromContig3971 21 21 SNP 1 A 2 A/G 58.2/40.0 32/22 55 A 58.18181818 32 G 40 22 ConsensusfromContig4668 137 137 SNP 1 A 1 T 100 55 55 T 100 55 ConsensusfromContig5617 137 129 SNP 1 C 2 C/T 52.7/47.3 29/26 55 C 52.72727273 29 T 47.27272727 26 ConsensusfromContig3175 107 65 SNP 1 T 2 C/T 60.7/39.3 34/22 56 C 60.71428571 34 T 39.28571429 22 ConsensusfromContig3203 345 337 SNP 1 A 1 G 100 56 56 G 100 56 ConsensusfromContig4756 341 311 SNP 1 T 2 C/T 58.9/41.1 33/23 56 C 58.92857143 33 T 41.07142857 23 ConsensusfromContig5612 108 108 SNP 1 A 2 C/A 64.3/35.7 36/20 56 C 64.28571429 36 A 35.71428571 20 ConsensusfromContig5705 236 35 SNP 1 T 1 C 100 56 56 C 100 56 ConsensusfromContig6702 241 211 SNP 1 A 2 C/A 62.5/37.5 35/21 56 C 62.5 35 A 37.5 21 ConsensusfromContig8482 289 224 SNP 1 A 2 G/A 58.9/41.1 33/23 56 G 58.92857143 33 A 41.07142857 23 ConsensusfromContig8865 79 76 SNP 1 C 2 T/C 62.5/37.5 35/21 56 T 62.5 35 C 37.5 21 ConsensusfromContig907 298 241 SNP 1 G 1 A 100 57 57 A 100 57 ConsensusfromContig1193 332 320 SNP 1 T 2 T/C 56.1/43.9 32/25 57 T 56.14035088 32 C 43.85964912 25 ConsensusfromContig1364 163 151 SNP 1 C 1 T 100 57 57 T 100 57 ConsensusfromContig3234 335 319 SNP 1 A 1 G 100 57 57 G 100 57 ConsensusfromContig4162 217 164 SNP 1 C 1 G 100 57 57 G 100 57 ConsensusfromContig4332 120 90 SNP 1 A 2 A/C 56.1/43.9 32/25 57 A 56.14035088 32 C 43.85964912 25 ConsensusfromContig5901 312 312 SNP 1 C 1 T 98.2 56 57 T 98.24561404 56 ConsensusfromContig5983 71 59 SNP 1 G 1 C 93 53 57 C 92.98245614 53 ConsensusfromContig6623 311 274 SNP 1 A 1 G 75.4 43 57 G 75.43859649 43 ConsensusfromContig7692 335 287 SNP 1 T 2 T/G 49.1/45.6 28/26 57 T 49.12280702 28 G 45.61403509 26 ConsensusfromContig8777 151 151 SNP 1 C 2 T/C 61.4/38.6 35/22 57 T 61.40350877 35 C 38.59649123 22 ConsensusfromContig36 323 284 SNP 1 A 1 C 100 58 58 C 100 58 ConsensusfromContig2275 68 68 SNP 1 C 1 A 75.9 44 58 A 75.86206897 44 ConsensusfromContig3130 80 80 SNP 1 A 1 T 100 58 58 T 100 58 ConsensusfromContig3219 35 22 SNP 1 T 1 C 69 40 58 C 68.96551724 40 ConsensusfromContig4152 124 87 SNP 1 G 2 A/G 56.9/43.1 33/25 58 A 56.89655172 33 G 43.10344828 25 ConsensusfromContig4960 323 273 SNP 1 C 1 T 100 58 58 T 100 58 ConsensusfromContig6702 237 207 SNP 1 A 2 T/A 62.1/36.2 36/21 58 T 62.06896552 36 A 36.20689655 21 ConsensusfromContig7609 104 102 SNP 1 C 1 T 100 58 58 T 100 58 ConsensusfromContig8403 476 378 SNP 1 A 2 C/A 63.8/36.2 37/21 58 C 63.79310345 37 A 36.20689655 21 ConsensusfromContig8652 22 22 SNP 1 T 2 T/A 60.3/39.7 35/23 58 T 60.34482759 35 A 39.65517241 23 ConsensusfromContig672 144 124 SNP 1 G 2 A/G 64.4/35.6 38/21 59 A 64.40677966 38 G 35.59322034 21 ConsensusfromContig1296 122 116 SNP 1 C 1 A 100 59 59 A 100 59 ConsensusfromContig3219 227 214 SNP 1 C 1 T 86.4 51 59 T 86.44067797 51 ConsensusfromContig4297 77 68 SNP 1 C 2 C/G 64.4/35.6 38/21 59 C 64.40677966 38 G 35.59322034 21 ConsensusfromContig5851 137 137 SNP 1 G 2 G/T 61.0/37.3 36/22 59 G 61.01694915 36 T 37.28813559 22 ConsensusfromContig7048 357 351 SNP 1 A 2 A/T 59.3/39.0 35/23 59 A 59.3220339 35 T 38.98305085 23 ConsensusfromContig7411 61 61 SNP 1 C 1 T 100 59 59 T 100 59 ConsensusfromContig7542 132 111 SNP 1 C 1 T 81.4 48 59 T 81.3559322 48 ConsensusfromContig7548 213 188 SNP 1 C 1 T 100 59 59 T 100 59 ConsensusfromContig8969 508 508 SNP 1 A 1 G 100 59 59 G 100 59 ConsensusfromContig9005 233 197 SNP 1 T 2 T/C 64.4/35.6 38/21 59 T 64.40677966 38 C 35.59322034 21 ConsensusfromContig594 125 101 SNP 1 C 1 T 100 60 60 T 100 60 ConsensusfromContig602 171 162 SNP 1 G 1 A 85 51 60 A 85 51 ConsensusfromContig832 159 128 SNP 1 G 1 A 100 60 60 A 100 60 ConsensusfromContig2227 108 108 SNP 1 C 1 T 86.7 52 60 T 86.66666667 52 ConsensusfromContig2641 608 427 SNP 1 C 1 T 100 60 60 T 100 60 ConsensusfromContig3971 18 18 SNP 1 C 2 C/A 56.7/41.7 34/25 60 C 56.66666667 34 A 41.66666667 25 ConsensusfromContig4203 482 326 SNP 1 A 1 C 96.7 58 60 C 96.66666667 58 ConsensusfromContig5700 34 34 SNP 1 C 1 T 76.7 46 60 T 76.66666667 46 ConsensusfromContig5829 132 128 SNP 1 T 2 G/T 55.0/45.0 33/27 60 G 55 33 T 45 27 ConsensusfromContig6070 57 57 SNP 1 G 2 G/A 58.3/41.7 35/25 60 G 58.33333333 35 A 41.66666667 25 ConsensusfromContig6258 288 288 SNP 1 G 2 G/A 63.3/36.7 38/22 60 G 63.33333333 38 A 36.66666667 22 ConsensusfromContig6481 78 78 SNP 1 G 2 G/C 60.0/40.0 36/24 60 G 60 36 C 40 24 ConsensusfromContig7113 522 412 SNP 1 A 1 T 100 60 60 T 100 60 ConsensusfromContig7529 496 491 SNP 1 A 2 A/C 56.7/43.3 34/26 60 A 56.66666667 34 C 43.33333333 26 ConsensusfromContig8011 795 712 SNP 1 A 2 G/A 63.3/36.7 38/22 60 G 63.33333333 38 A 36.66666667 22 ConsensusfromContig8678 206 172 SNP 1 A 2 G/A 63.3/36.7 38/22 60 G 63.33333333 38 A 36.66666667 22 ConsensusfromContig244 163 141 SNP 1 A 2 A/T 52.5/47.5 32/29 61 A 52.45901639 32 T 47.54098361 29 ConsensusfromContig1364 460 422 SNP 1 T 1 C 100 61 61 C 100 61 ConsensusfromContig2776 89 61 SNP 1 C 1 T 98.4 60 61 T 98.36065574 60 ConsensusfromContig4839 786 730 SNP 1 A 1 G 100 61 61 G 100 61 ConsensusfromContig5829 296 292 SNP 1 C 1 A 90.2 55 61 A 90.16393443 55 ConsensusfromContig6550 145 128 SNP 1 T 2 C/T 60.7/39.3 37/24 61 C 60.6557377 37 T 39.3442623 24 ConsensusfromContig7013 151 151 SNP 1 A 2 G/A 57.4/42.6 35/26 61 G 57.37704918 35 A 42.62295082 26 ConsensusfromContig7810 338 326 SNP 1 G 1 A 75.4 46 61 A 75.40983607 46 ConsensusfromContig8811 162 162 SNP 1 G 1 A 73.8 45 61 A 73.7704918 45 ConsensusfromContig460 232 215 SNP 1 A 2 C/A 51.6/48.4 32/30 62 C 51.61290323 32 A 48.38709677 30 ConsensusfromContig462 167 167 SNP 1 T 2 T/C 61.3/38.7 38/24 62 T 61.29032258 38 C 38.70967742 24 ConsensusfromContig604 436 405 SNP 1 A 1 T 100 62 62 T 100 62 ConsensusfromContig2275 86 86 SNP 1 C 2 C/A 61.3/38.7 38/24 62 C 61.29032258 38 A 38.70967742 24 ConsensusfromContig6570 14 14 SNP 1 G 2 G/A 53.2/46.8 33/29 62 G 53.22580645 33 A 46.77419355 29 ConsensusfromContig7548 197 172 SNP 1 A 1 G 90.3 56 62 G 90.32258065 56 ConsensusfromContig8011 789 706 SNP 1 C 2 C/T 62.9/37.1 39/23 62 C 62.90322581 39 T 37.09677419 23 ConsensusfromContig8811 39 39 SNP 1 G 2 A/G 54.8/45.2 34/28 62 A 54.83870968 34 G 45.16129032 28 ConsensusfromContig8811 123 123 SNP 1 T 2 G/T 59.7/40.3 37/25 62 G 59.67741935 37 T 40.32258065 25 ConsensusfromContig230 197 197 SNP 1 G 1 T 90.5 57 63 T 90.47619048 57 ConsensusfromContig458 56 30 SNP 1 A 1 G 74.6 47 63 G 74.6031746 47 ConsensusfromContig665 142 137 SNP 1 C 2 C/T 60.3/39.7 38/25 63 C 60.31746032 38 T 39.68253968 25 ConsensusfromContig995 144 95 SNP 1 A 1 G 100 63 63 G 100 63 ConsensusfromContig6617 143 119 SNP 1 G 2 T/G 60.3/39.7 38/25 63 T 60.31746032 38 G 39.68253968 25 ConsensusfromContig6631 194 68 SNP 1 T 2 C/T 52.4/47.6 33/30 63 C 52.38095238 33 T 47.61904762 30 ConsensusfromContig454 64 45 SNP 1 C 1 T 100 64 64 T 100 64 ConsensusfromContig2314 86 71 SNP 1 C 2 C/A 59.4/40.6 38/26 64 C 59.375 38 A 40.625 26 ConsensusfromContig2619 314 306 SNP 1 T 1 C 68.8 44 64 C 68.75 44 ConsensusfromContig2658 94 82 SNP 1 C 2 C/T 62.5/37.5 40/24 64 C 62.5 40 T 37.5 24 ConsensusfromContig2776 332 304 SNP 1 C 1 T 100 64 64 T 100 64 ConsensusfromContig3189 635 565 SNP 1 A 1 G 70.3 45 64 G 70.3125 45 ConsensusfromContig4114 60 43 SNP 1 A 1 G 100 64 64 G 100 64 ConsensusfromContig5829 129 125 SNP 1 A 2 T/A 51.6/48.4 33/31 64 T 51.5625 33 A 48.4375 31 ConsensusfromContig8811 114 114 SNP 1 T 1 C 65.6 42 64 C 65.625 42 ConsensusfromContig554 316 264 SNP 1 T 2 T/C 50.8/47.7 33/31 65 T 50.76923077 33 C 47.69230769 31 ConsensusfromContig665 165 160 SNP 1 C 1 T 100 65 65 T 100 65 ConsensusfromContig2517 164 149 SNP 1 A 1 T 98.5 64 65 T 98.46153846 64 ConsensusfromContig3805 98 98 SNP 1 T 1 C 100 65 65 C 100 65 ConsensusfromContig4049 544 377 SNP 1 C 1 T 100 65 65 T 100 65 ConsensusfromContig6382 59 46 SNP 1 A 1 G 86.2 56 65 G 86.15384615 56 ConsensusfromContig7810 389 377 SNP 1 T 2 C/T 56.9/43.1 37/28 65 C 56.92307692 37 T 43.07692308 28 ConsensusfromContig8825 103 103 SNP 1 A 1 C 78.5 51 65 C 78.46153846 51 ConsensusfromContig240 219 212 SNP 1 G 2 G/C 63.6/36.4 42/24 66 G 63.63636364 42 C 36.36363636 24 ConsensusfromContig660 232 203 SNP 1 A 2 G/A 62.1/37.9 41/25 66 G 62.12121212 41 A 37.87878788 25 ConsensusfromContig2211 88 88 SNP 1 C 2 C/T 59.1/40.9 39/27 66 C 59.09090909 39 T 40.90909091 27 ConsensusfromContig3036 294 258 SNP 1 T 2 T/C 53.0/47.0 35/31 66 T 53.03030303 35 C 46.96969697 31 ConsensusfromContig8652 23 23 SNP 1 A 1 G 65.2 43 66 G 65.15151515 43 ConsensusfromContig8703 384 371 SNP 1 A 1 G 68.2 45 66 G 68.18181818 45 ConsensusfromContig3036 297 261 SNP 1 G 2 G/T 56.7/43.3 38/29 67 G 56.71641791 38 T 43.28358209 29 ConsensusfromContig5274 321 294 SNP 1 C 2 T/C 62.7/37.3 42/25 67 T 62.68656716 42 C 37.31343284 25 ConsensusfromContig5616 417 398 SNP 1 C 2 A/C 64.2/35.8 43/24 67 A 64.17910448 43 C 35.82089552 24 ConsensusfromContig6360 152 120 SNP 1 A 2 A/T 53.7/46.3 36/31 67 A 53.73134328 36 T 46.26865672 31 ConsensusfromContig7048 147 141 SNP 1 T 2 C/T 58.2/41.8 39/28 67 C 58.20895522 39 T 41.79104478 28 ConsensusfromContig7407 41 41 SNP 1 A 1 G 74.6 50 67 G 74.62686567 50 ConsensusfromContig6626 156 133 SNP 1 T 2 C/T 52.9/47.1 36/32 68 C 52.94117647 36 T 47.05882353 32 ConsensusfromContig7209 398 388 SNP 1 A 1 T 100 68 68 T 100 68 ConsensusfromContig7694 101 101 SNP 1 A 1 G 98.5 67 68 G 98.52941176 67 ConsensusfromContig8969 384 384 SNP 1 G 1 T 100 68 68 T 100 68 ConsensusfromContig3840 403 351 SNP 1 A 1 G 100 69 69 G 100 69 ConsensusfromContig4664 931 893 SNP 1 C 1 G 69.6 48 69 G 69.56521739 48 ConsensusfromContig7082 90 71 SNP 1 T 1 C 100 69 69 C 100 69 ConsensusfromContig8673 118 116 SNP 1 G 2 G/T 59.4/40.6 41/28 69 G 59.42028986 41 T 40.57971014 28 ConsensusfromContig2211 70 70 SNP 1 G 2 G/A 62.9/37.1 44/26 70 G 62.85714286 44 A 37.14285714 26 ConsensusfromContig3219 186 173 SNP 1 G 2 T/G 52.9/47.1 37/33 70 T 52.85714286 37 G 47.14285714 33 ConsensusfromContig4513 324 324 SNP 1 G 1 A 100 70 70 A 100 70 ConsensusfromContig4846 33 33 SNP 1 A 2 A/G 52.9/47.1 37/33 70 A 52.85714286 37 G 47.14285714 33 ConsensusfromContig6667 72 53 SNP 1 T 1 C 95.7 67 70 C 95.71428571 67 ConsensusfromContig8208 326 305 SNP 1 G 2 G/A 60.0/40.0 42/28 70 G 60 42 A 40 28 ConsensusfromContig8354 147 138 SNP 1 A 1 G 100 70 70 G 100 70 ConsensusfromContig8559 20 20 SNP 1 G 2 G/T 60.0/40.0 42/28 70 G 60 42 T 40 28 ConsensusfromContig230 41 41 SNP 1 A 2 G/A 56.3/43.7 40/31 71 G 56.33802817 40 A 43.66197183 31 ConsensusfromContig3203 130 122 SNP 1 A 2 C/A 59.2/40.8 42/29 71 C 59.15492958 42 A 40.84507042 29 ConsensusfromContig6127 83 52 SNP 1 G 2 A/G 60.6/39.4 43/28 71 A 60.56338028 43 G 39.43661972 28 ConsensusfromContig7048 327 321 SNP 1 A 2 A/C 59.2/40.8 42/29 71 A 59.15492958 42 C 40.84507042 29 ConsensusfromContig7501 271 234 SNP 1 T 1 C 74.6 53 71 C 74.64788732 53 ConsensusfromContig7667 232 232 SNP 1 C 2 T/C 53.5/46.5 38/33 71 T 53.52112676 38 C 46.47887324 33 ConsensusfromContig2597 370 155 SNP 1 G 1 A 98.6 71 72 A 98.61111111 71 ConsensusfromContig2624 54 24 SNP 1 C 1 T 100 72 72 T 100 72 ConsensusfromContig4152 157 120 SNP 1 T 1 C 95.8 69 72 C 95.83333333 69 ConsensusfromContig6446 202 202 SNP 1 C 2 T/C 52.8/47.2 38/34 72 T 52.77777778 38 C 47.22222222 34 ConsensusfromContig8865 52 49 SNP 1 C 1 T 77.8 56 72 T 77.77777778 56 ConsensusfromContig6016 216 184 SNP 1 C 2 A/C 53.4/45.2 39/33 73 A 53.42465753 39 C 45.20547945 33 ConsensusfromContig8145 540 534 SNP 1 A 1 G 86.3 63 73 G 86.30136986 63 ConsensusfromContig8585 350 309 SNP 1 A 2 A/C 54.8/45.2 40/33 73 A 54.79452055 40 C 45.20547945 33 ConsensusfromContig8636 156 156 SNP 1 A 2 A/G 56.2/43.8 41/32 73 A 56.16438356 41 G 43.83561644 32 ConsensusfromContig8969 432 432 SNP 1 C 1 T 100 73 73 T 100 73 ConsensusfromContig1193 416 404 SNP 1 T 2 C/T 60.8/39.2 45/29 74 C 60.81081081 45 T 39.18918919 29 ConsensusfromContig2641 765 584 SNP 1 C 1 T 66.2 49 74 T 66.21621622 49 ConsensusfromContig5254 280 265 SNP 1 A 2 A/G 60.8/39.2 45/29 74 A 60.81081081 45 G 39.18918919 29 ConsensusfromContig7394 398 382 SNP 1 G 1 C 100 74 74 C 100 74 ConsensusfromContig8458 432 318 SNP 1 T 1 C 66.2 49 74 C 66.21621622 49 ConsensusfromContig230 68 68 SNP 1 G 1 A 81.3 61 75 A 81.33333333 61 ConsensusfromContig1678 515 515 SNP 1 G 1 T 80 60 75 T 80 60 ConsensusfromContig2483 302 272 SNP 1 T 2 T/A 57.3/42.7 43/32 75 T 57.33333333 43 A 42.66666667 32 ConsensusfromContig3272 202 191 SNP 1 A 2 A/T 60.0/40.0 45/30 75 A 60 45 T 40 30 ConsensusfromContig3578 144 133 SNP 1 G 1 C 65.3 49 75 C 65.33333333 49 ConsensusfromContig7385 132 128 SNP 1 T 2 C/T 57.3/42.7 43/32 75 C 57.33333333 43 T 42.66666667 32 ConsensusfromContig7694 104 104 SNP 1 A 1 C 89.3 67 75 C 89.33333333 67 ConsensusfromContig7937 512 499 SNP 1 C 1 G 98.7 74 75 G 98.66666667 74 ConsensusfromContig554 323 271 SNP 1 A 2 G/A 64.5/35.5 49/27 76 G 64.47368421 49 A 35.52631579 27 ConsensusfromContig607 205 128 SNP 1 T 1 C 100 76 76 C 100 76 ConsensusfromContig1193 130 118 SNP 1 T 1 C 88.2 67 76 C 88.15789474 67 ConsensusfromContig2239 280 280 SNP 1 A 2 A/C 60.5/39.5 46/30 76 A 60.52631579 46 C 39.47368421 30 ConsensusfromContig5362 495 483 SNP 1 T 1 C 73.7 56 76 C 73.68421053 56 ConsensusfromContig7013 168 168 SNP 1 G 2 T/G 57.9/42.1 44/32 76 T 57.89473684 44 G 42.10526316 32 ConsensusfromContig7529 430 425 SNP 1 C 1 A 65.8 50 76 A 65.78947368 50 ConsensusfromContig8865 58 55 SNP 1 C 2 C/T 60.5/39.5 46/30 76 C 60.52631579 46 T 39.47368421 30 ConsensusfromContig5554 319 315 SNP 1 N 1 A 100 77 77 A 100 77 ConsensusfromContig6483 43 43 SNP 1 G 1 A 98.7 76 77 A 98.7012987 76 ConsensusfromContig6704 278 255 SNP 1 C 2 C/T 59.7/40.3 46/31 77 C 59.74025974 46 T 40.25974026 31 ConsensusfromContig8008 325 325 SNP 1 A 2 G/A 50.6/49.4 39/38 77 G 50.64935065 39 A 49.35064935 38 ConsensusfromContig8145 618 612 SNP 1 C 1 A 100 77 77 A 100 77 ConsensusfromContig8993 149 28 SNP 1 A 1 T 80.5 62 77 T 80.51948052 62 ConsensusfromContig2414 142 108 SNP 1 T 1 C 75.6 59 78 C 75.64102564 59 ConsensusfromContig3280 107 76 SNP 1 A 1 T 88.5 69 78 T 88.46153846 69 ConsensusfromContig3727 56 56 SNP 1 C 1 T 79.5 62 78 T 79.48717949 62 ConsensusfromContig1534 116 104 SNP 1 A 2 A/T 57.0/43.0 45/34 79 A 56.96202532 45 T 43.03797468 34 ConsensusfromContig4037 358 358 SNP 1 A 2 G/A 50.6/49.4 40/39 79 G 50.63291139 40 A 49.36708861 39 ConsensusfromContig4573 304 229 SNP 1 C 1 T 64.6 51 79 T 64.55696203 51 ConsensusfromContig6004 266 251 SNP 1 T 1 C 89.9 71 79 C 89.87341772 71 ConsensusfromContig6360 159 127 SNP 1 C 1 T 100 79 79 T 100 79 ConsensusfromContig7667 227 227 SNP 1 A 2 T/A 50.6/49.4 40/39 79 T 50.63291139 40 A 49.36708861 39 ConsensusfromContig8655 482 482 SNP 1 C 1 T 100 79 79 T 100 79 ConsensusfromContig8877 123 119 SNP 1 A 1 C 100 79 79 C 100 79 ConsensusfromContig292 401 401 SNP 1 C 1 T 100 80 80 T 100 80 ConsensusfromContig692 117 117 SNP 1 A 2 A/G 62.5/37.5 50/30 80 A 62.5 50 G 37.5 30 ConsensusfromContig3189 654 584 SNP 1 A 1 T 85 68 80 T 85 68 ConsensusfromContig3236 190 187 SNP 1 C 2 T/C 63.8/36.2 51/29 80 T 63.75 51 C 36.25 29 ConsensusfromContig261 333 333 SNP 1 G 1 T 69.1 56 81 T 69.13580247 56 ConsensusfromContig2275 113 113 SNP 1 A 2 A/G 63.0/37.0 51/30 81 A 62.96296296 51 G 37.03703704 30 ConsensusfromContig5829 234 230 SNP 1 G 2 A/G 58.0/42.0 47/34 81 A 58.02469136 47 G 41.97530864 34 ConsensusfromContig7179 159 140 SNP 1 C 2 A/C 63.0/37.0 51/30 81 A 62.96296296 51 C 37.03703704 30 ConsensusfromContig604 346 315 SNP 1 G 2 G/A 58.5/41.5 48/34 82 G 58.53658537 48 A 41.46341463 34 ConsensusfromContig3344 294 286 SNP 1 C 2 T/C 53.7/46.3 44/38 82 T 53.65853659 44 C 46.34146341 38 ConsensusfromContig6176 139 137 SNP 1 A 1 G 100 82 82 G 100 82 ConsensusfromContig7265 165 165 SNP 1 C 1 T 97.6 80 82 T 97.56097561 80 ConsensusfromContig8452 131 131 SNP 1 C 1 T 100 82 82 T 100 82 ConsensusfromContig431 214 212 SNP 1 G 2 G/C 63.9/36.1 53/30 83 G 63.85542169 53 C 36.14457831 30 ConsensusfromContig2024 601 601 SNP 1 A 1 G 97.6 81 83 G 97.59036145 81 ConsensusfromContig2778 107 48 SNP 1 A 1 T 97.6 81 83 T 97.59036145 81 ConsensusfromContig8008 274 274 SNP 1 T 2 T/A 60.2/39.8 50/33 83 T 60.24096386 50 A 39.75903614 33 ConsensusfromContig2148 581 370 SNP 1 A 1 T 78.6 66 84 T 78.57142857 66 ConsensusfromContig3267 399 398 SNP 1 G 2 A/G 61.9/38.1 52/32 84 A 61.9047619 52 G 38.0952381 32 ConsensusfromContig5253 232 232 SNP 1 C 2 C/T 61.9/38.1 52/32 84 C 61.9047619 52 T 38.0952381 32 ConsensusfromContig8139 348 332 SNP 1 A 2 A/G 57.1/42.9 48/36 84 A 57.14285714 48 G 42.85714286 36 ConsensusfromContig579 200 167 SNP 1 T 2 T/C 64.7/35.3 55/30 85 T 64.70588235 55 C 35.29411765 30 ConsensusfromContig7502 191 154 SNP 1 A 1 C 81.2 69 85 C 81.17647059 69 ConsensusfromContig4279 137 112 SNP 1 C 1 T 100 86 86 T 100 86 ConsensusfromContig5901 346 346 SNP 1 A 1 T 95.3 82 86 T 95.34883721 82 ConsensusfromContig6037 153 137 SNP 1 G 1 A 100 86 86 A 100 86 ConsensusfromContig6498 68 60 SNP 1 A 2 A/C 54.7/45.3 47/39 86 A 54.65116279 47 C 45.34883721 39 ConsensusfromContig7141 80 80 SNP 1 T 2 C/T 50.0/50.0 43/43 86 C 50 43 T 50 43 ConsensusfromContig8452 130 130 SNP 1 A 1 G 100 86 86 G 100 86 ConsensusfromContig8705 290 259 SNP 1 A 1 T 100 86 86 T 100 86 ConsensusfromContig1388 329 258 SNP 1 G 1 T 100 87 87 T 100 87 ConsensusfromContig2645 188 188 SNP 1 C 2 C/T 60.9/39.1 53/34 87 C 60.91954023 53 T 39.08045977 34 ConsensusfromContig5849 186 160 SNP 1 G 1 A 100 87 87 A 100 87 ConsensusfromContig5936 8 6 SNP 1 C 1 G 100 87 87 G 100 87 ConsensusfromContig6258 399 399 SNP 1 G 1 A 74.7 65 87 A 74.71264368 65 ConsensusfromContig7113 400 290 SNP 1 C 1 T 100 87 87 T 100 87 ConsensusfromContig672 330 309 SNP 1 A 1 G 78.4 69 88 G 78.40909091 69 ConsensusfromContig3190 527 506 SNP 1 C 1 T 100 88 88 T 100 88 ConsensusfromContig3199 236 228 SNP 1 C 1 T 69.3 61 88 T 69.31818182 61 ConsensusfromContig3280 518 463 SNP 1 C 2 G/C 52.3/47.7 46/42 88 G 52.27272727 46 C 47.72727273 42 ConsensusfromContig5612 112 112 SNP 1 G 2 G/T 59.1/40.9 52/36 88 G 59.09090909 52 T 40.90909091 36 ConsensusfromContig29 190 99 SNP 1 A 1 C 93.3 83 89 C 93.25842697 83 ConsensusfromContig3267 381 380 SNP 1 A 1 G 69.7 62 89 G 69.66292135 62 ConsensusfromContig722 46 46 SNP 1 A 1 G 100 90 90 G 100 90 ConsensusfromContig3267 363 362 SNP 1 G 2 G/T 61.1/38.9 55/35 90 G 61.11111111 55 T 38.88888889 35 ConsensusfromContig3315 410 351 SNP 1 T 2 T/C 63.3/36.7 57/33 90 T 63.33333333 57 C 36.66666667 33 ConsensusfromContig6004 246 231 SNP 1 T 2 T/C 51.1/48.9 46/44 90 T 51.11111111 46 C 48.88888889 44 ConsensusfromContig31 261 204 SNP 1 A 1 G 100 91 91 G 100 91 ConsensusfromContig462 215 215 SNP 1 G 2 G/T 60.4/39.6 55/36 91 G 60.43956044 55 T 39.56043956 36 ConsensusfromContig1193 145 133 SNP 1 T 1 C 90.1 82 91 C 90.10989011 82 ConsensusfromContig1231 532 227 SNP 1 A 1 G 79.1 72 91 G 79.12087912 72 ConsensusfromContig2293 57 44 SNP 1 T 1 A 100 91 91 A 100 91 ConsensusfromContig3190 721 699 SNP 1 A 1 G 97.8 89 91 G 97.8021978 89 ConsensusfromContig7529 267 262 SNP 1 A 1 C 100 91 91 C 100 91 ConsensusfromContig8884 126 126 SNP 1 A 2 A/G 61.5/38.5 56/35 91 A 61.53846154 56 G 38.46153846 35 ConsensusfromContig1534 344 332 SNP 1 A 2 A/G 60.9/39.1 56/36 92 A 60.86956522 56 G 39.13043478 36 ConsensusfromContig3036 151 121 SNP 1 G 2 A/G 50.0/50.0 46/46 92 A 50 46 G 50 46 ConsensusfromContig4279 121 96 SNP 1 C 1 T 100 92 92 T 100 92 ConsensusfromContig607 227 150 SNP 1 C 1 T 93.5 87 93 T 93.5483871 87 ConsensusfromContig2619 67 59 SNP 1 A 1 G 100 93 93 G 100 93 ConsensusfromContig4782 615 582 SNP 1 C 1 A 74.2 69 93 A 74.19354839 69 ConsensusfromContig7529 541 536 SNP 1 A 1 G 83.9 78 93 G 83.87096774 78 ConsensusfromContig7667 221 221 SNP 1 A 2 G/A 54.8/45.2 51/42 93 G 54.83870968 51 A 45.16129032 42 ConsensusfromContig5998 98 94 SNP 1 C 2 C/T 51.1/48.9 48/46 94 C 51.06382979 48 T 48.93617021 46 ConsensusfromContig995 273 224 SNP 1 A 1 T 100 95 95 T 100 95 ConsensusfromContig1755 89 89 SNP 1 G 1 A 100 95 95 A 100 95 ConsensusfromContig2658 113 101 SNP 1 A 2 A/C 63.2/36.8 60/35 95 A 63.15789474 60 C 36.84210526 35 ConsensusfromContig1901 107 90 SNP 1 A 1 G 99 95 96 G 98.95833333 95 ConsensusfromContig3490 108 100 SNP 1 C 2 C/T 57.3/42.7 55/41 96 C 57.29166667 55 T 42.70833333 41 ConsensusfromContig7548 86 61 SNP 1 T 2 T/G 64.6/35.4 62/34 96 T 64.58333333 62 G 35.41666667 34 ConsensusfromContig8587 161 133 SNP 1 A 2 A/G 57.3/42.7 55/41 96 A 57.29166667 55 G 42.70833333 41 ConsensusfromContig2024 595 595 SNP 1 C 1 T 99 96 97 T 98.96907216 96 ConsensusfromContig5998 11 7 SNP 1 A 1 T 100 97 97 T 100 97 ConsensusfromContig6502 73 51 SNP 1 T 2 T/G 61.9/38.1 60/37 97 T 61.8556701 60 G 38.1443299 37 ConsensusfromContig8197 221 212 SNP 1 C 1 A 100 97 97 A 100 97 ConsensusfromContig387 182 115 SNP 1 G 1 A 100 98 98 A 100 98 ConsensusfromContig3794 199 181 SNP 1 T 1 G 80.8 80 99 G 80.80808081 80 ConsensusfromContig6389 136 125 SNP 1 C 1 A 100 99 99 A 100 99 ConsensusfromContig8903 98 98 SNP 1 G 2 G/T 50.5/49.5 50/49 99 G 50.50505051 50 T 49.49494949 49 ConsensusfromContig491 125 125 SNP 1 G 1 A 86 86 100 A 86 86 ConsensusfromContig3280 65 34 SNP 1 A 1 C 74 74 100 C 74 74 ConsensusfromContig5829 228 224 SNP 1 C 2 T/C 52.0/48.0 52/48 100 T 52 52 C 48 48 ConsensusfromContig7542 373 352 SNP 1 C 2 A/C 53.0/47.0 53/47 100 A 53 53 C 47 47 ConsensusfromContig4778 122 117 SNP 1 G 2 G/A 61.4/38.6 62/39 101 G 61.38613861 62 A 38.61386139 39 ConsensusfromContig8475 324 280 SNP 1 C 2 T/C 57.4/42.6 58/43 101 T 57.42574257 58 C 42.57425743 43 ConsensusfromContig8884 125 125 SNP 1 C 2 C/T 58.4/41.6 59/42 101 C 58.41584158 59 T 41.58415842 42 ConsensusfromContig426 233 197 SNP 1 C 1 T 71.6 73 102 T 71.56862745 73 ConsensusfromContig4783 509 302 SNP 1 C 1 T 99 101 102 T 99.01960784 101 ConsensusfromContig7256 204 173 SNP 1 G 2 G/A 55.9/44.1 57/45 102 G 55.88235294 57 A 44.11764706 45 ConsensusfromContig7265 168 168 SNP 1 T 1 G 78.4 80 102 G 78.43137255 80 ConsensusfromContig1428 195 193 SNP 1 A 2 G/A 57.3/42.7 59/44 103 G 57.2815534 59 A 42.7184466 44 ConsensusfromContig4019 98 98 SNP 1 A 1 G 89.3 92 103 G 89.32038835 92 ConsensusfromContig4152 361 324 SNP 1 T 1 C 83.5 86 103 C 83.49514563 86 ConsensusfromContig7045 10 10 SNP 1 C 1 T 100 103 103 T 100 103 ConsensusfromContig8482 307 242 SNP 1 T 2 C/T 64.4/35.6 67/37 104 C 64.42307692 67 T 35.57692308 37 ConsensusfromContig467 225 223 SNP 1 A 1 G 100 105 105 G 100 105 ConsensusfromContig1994 161 161 SNP 1 T 2 T/G 58.1/41.9 61/44 105 T 58.0952381 61 G 41.9047619 44 ConsensusfromContig6044 15 15 SNP 1 T 1 C 78.1 82 105 C 78.0952381 82 ConsensusfromContig3280 216 185 SNP 1 C 2 C/T 59.4/40.6 63/43 106 C 59.43396226 63 T 40.56603774 43 ConsensusfromContig3623 172 172 SNP 1 C 1 G 77.4 82 106 G 77.35849057 82 ConsensusfromContig2645 186 186 SNP 1 A 2 A/G 57.9/42.1 62/45 107 A 57.94392523 62 G 42.05607477 45 ConsensusfromContig7210 150 150 SNP 1 A 1 G 97.2 104 107 G 97.19626168 104 ConsensusfromContig8717 309 309 SNP 1 C 1 T 100 107 107 T 100 107 ConsensusfromContig1428 239 237 SNP 1 T 2 T/A 60.2/39.8 65/43 108 T 60.18518519 65 A 39.81481481 43 ConsensusfromContig8616 58 58 SNP 1 A 2 T/A 62.0/38.0 67/41 108 T 62.03703704 67 A 37.96296296 41 ConsensusfromContig3344 219 211 SNP 1 A 2 T/A 56.0/44.0 61/48 109 T 55.96330275 61 A 44.03669725 48 ConsensusfromContig5705 239 38 SNP 1 C 2 C/T 54.1/45.9 59/50 109 C 54.12844037 59 T 45.87155963 50 ConsensusfromContig6004 291 276 SNP 1 G 1 A 74.3 81 109 A 74.31192661 81 ConsensusfromContig7580 515 426 SNP 1 C 1 G 87.2 95 109 G 87.1559633 95 ConsensusfromContig160 23 16 SNP 1 C 2 C/T 62.2/37.8 69/42 111 C 62.16216216 69 T 37.83783784 42 ConsensusfromContig7411 146 146 SNP 1 G 1 T 84.7 94 111 T 84.68468468 94 ConsensusfromContig8139 327 311 SNP 1 C 2 C/T 52.3/47.7 58/53 111 C 52.25225225 58 T 47.74774775 53 ConsensusfromContig7667 149 149 SNP 1 C 1 T 72.3 81 112 T 72.32142857 81 ConsensusfromContig8825 66 66 SNP 1 A 1 G 98.2 110 112 G 98.21428571 110 ConsensusfromContig3623 28 28 SNP 1 A 2 G/A 55.8/44.2 63/50 113 G 55.75221239 63 A 44.24778761 50 ConsensusfromContig6030 30 30 SNP 1 A 2 A/C 58.4/41.6 66/47 113 A 58.40707965 66 C 41.59292035 47 ConsensusfromContig8008 265 265 SNP 1 A 2 G/A 57.5/42.5 65/48 113 G 57.52212389 65 A 42.47787611 48 ConsensusfromContig5738 116 116 SNP 1 G 2 A/G 55.3/43.9 63/50 114 A 55.26315789 63 G 43.85964912 50 ConsensusfromContig7113 412 302 SNP 1 T 1 C 99.1 113 114 C 99.12280702 113 ConsensusfromContig8167 180 180 SNP 1 C 2 C/G 63.2/36.8 72/42 114 C 63.15789474 72 G 36.84210526 42 ConsensusfromContig6070 154 154 SNP 1 A 2 G/A 60.9/39.1 70/45 115 G 60.86956522 70 A 39.13043478 45 ConsensusfromContig6312 125 125 SNP 1 C 2 C/T 50.4/49.6 58/57 115 C 50.43478261 58 T 49.56521739 57 ConsensusfromContig3189 572 502 SNP 1 T 1 C 94 109 116 C 93.96551724 109 ConsensusfromContig5253 143 143 SNP 1 A 2 G/A 52.1/47.9 61/56 117 G 52.13675214 61 A 47.86324786 56 ConsensusfromContig3270 138 49 SNP 1 A 2 A/G 50.0/50.0 59/59 118 A 50 59 G 50 59 ConsensusfromContig3277 190 190 SNP 1 C 1 T 73.7 87 118 T 73.72881356 87 ConsensusfromContig7141 129 129 SNP 1 G 2 G/T 60.2/39.8 71/47 118 G 60.16949153 71 T 39.83050847 47 ConsensusfromContig462 212 212 SNP 1 C 2 C/T 52.9/47.1 63/56 119 C 52.94117647 63 T 47.05882353 56 ConsensusfromContig3578 432 419 SNP 1 G 1 A 96.6 115 119 A 96.63865546 115 ConsensusfromContig7411 128 128 SNP 1 G 2 A/G 62.2/37.8 74/45 119 A 62.18487395 74 G 37.81512605 45 ConsensusfromContig7456 167 167 SNP 1 C 1 G 100 119 119 G 100 119 ConsensusfromContig5265 17 17 SNP 1 G 1 A 98.3 118 120 A 98.33333333 118 ConsensusfromContig8208 348 327 SNP 1 C 2 T/C 60.8/39.2 73/47 120 T 60.83333333 73 C 39.16666667 47 ConsensusfromContig3272 73 62 SNP 1 A 2 T/A 56.2/43.8 68/53 121 T 56.19834711 68 A 43.80165289 53 ConsensusfromContig732 40 24 SNP 1 G 1 A 100 122 122 A 100 122 ConsensusfromContig3272 332 321 SNP 1 A 2 A/G 50.8/49.2 62/60 122 A 50.81967213 62 G 49.18032787 60 ConsensusfromContig3280 373 333 SNP 1 T 1 C 65.6 80 122 C 65.57377049 80 ConsensusfromContig8208 356 335 SNP 1 G 2 A/G 54.9/45.1 67/55 122 A 54.91803279 67 G 45.08196721 55 ConsensusfromContig4114 454 433 SNP 1 C 2 C/A 56.9/43.1 70/53 123 C 56.91056911 70 A 43.08943089 53 ConsensusfromContig5943 112 112 SNP 1 C 1 A 84.6 104 123 A 84.55284553 104 ConsensusfromContig6634 20 20 SNP 1 T 1 C 92.7 114 123 C 92.68292683 114 ConsensusfromContig3490 115 107 SNP 1 A 2 A/C 54.8/45.2 68/56 124 A 54.83870968 68 C 45.16129032 56 ConsensusfromContig5943 111 111 SNP 1 T 1 A 87.9 109 124 A 87.90322581 109 ConsensusfromContig7456 172 172 SNP 1 C 1 T 100 124 124 T 100 124 ConsensusfromContig554 246 218 SNP 1 A 1 G 76 95 125 G 76 95 ConsensusfromContig3203 278 270 SNP 1 T 1 C 68 85 125 C 68 85 ConsensusfromContig7548 89 64 SNP 1 C 2 C/A 60.0/40.0 75/50 125 C 60 75 A 40 50 ConsensusfromContig8597 288 283 SNP 1 A 1 G 75.4 95 126 G 75.3968254 95 ConsensusfromContig3344 276 268 SNP 1 C 2 T/C 63.0/36.2 80/46 127 T 62.99212598 80 C 36.22047244 46 ConsensusfromContig5829 174 170 SNP 1 A 2 A/G 59.8/40.2 76/51 127 A 59.84251969 76 G 40.15748031 51 ConsensusfromContig6016 135 103 SNP 1 G 2 G/A 57.5/42.5 73/54 127 G 57.48031496 73 A 42.51968504 54 ConsensusfromContig6025 171 171 SNP 1 C 1 T 69.3 88 127 T 69.29133858 88 ConsensusfromContig6389 64 53 SNP 1 G 1 A 100 127 127 A 100 127 ConsensusfromContig7141 159 159 SNP 1 G 2 G/A 59.8/40.2 76/51 127 G 59.84251969 76 A 40.15748031 51 ConsensusfromContig1954 242 163 SNP 1 C 1 T 97.7 125 128 T 97.65625 125 ConsensusfromContig8777 130 130 SNP 1 T 1 G 83.6 107 128 G 83.59375 107 ConsensusfromContig434 181 169 SNP 1 G 1 A 100 129 129 A 100 129 ConsensusfromContig646 342 301 SNP 1 G 1 A 67.4 87 129 A 67.44186047 87 ConsensusfromContig7132 399 145 SNP 1 A 2 G/A 63.6/36.4 82/47 129 G 63.56589147 82 A 36.43410853 47 ConsensusfromContig3199 258 250 SNP 1 C 2 C/A 63.1/36.9 82/48 130 C 63.07692308 82 A 36.92307692 48 ConsensusfromContig6312 26 26 SNP 1 C 2 T/C 53.8/46.2 70/60 130 T 53.84615385 70 C 46.15384615 60 ConsensusfromContig8152 449 394 SNP 1 C 2 C/T 50.8/49.2 66/64 130 C 50.76923077 66 T 49.23076923 64 ConsensusfromContig8159 217 211 SNP 1 C 2 C/A 60.0/40.0 78/52 130 C 60 78 A 40 52 ConsensusfromContig275 177 154 SNP 1 A 2 C/A 58.8/39.7 77/52 131 C 58.77862595 77 A 39.69465649 52 ConsensusfromContig832 168 137 SNP 1 G 1 A 100 131 131 A 100 131 ConsensusfromContig1647 208 207 SNP 1 G 2 G/A 61.8/38.2 81/50 131 G 61.83206107 81 A 38.16793893 50 ConsensusfromContig1014 51 47 SNP 1 G 2 G/T 53.8/43.9 71/58 132 G 53.78787879 71 T 43.93939394 58 ConsensusfromContig2645 89 89 SNP 1 T 2 T/A 52.3/47.7 69/63 132 T 52.27272727 69 A 47.72727273 63 ConsensusfromContig3727 147 147 SNP 1 G 2 G/A 61.4/38.6 81/51 132 G 61.36363636 81 A 38.63636364 51 ConsensusfromContig4791 275 275 SNP 1 C 1 T 100 132 132 T 100 132 ConsensusfromContig7667 106 106 SNP 1 A 1 G 100 132 132 G 100 132 ConsensusfromContig3272 131 120 SNP 1 A 1 G 66.9 89 133 G 66.91729323 89 ConsensusfromContig8159 226 220 SNP 1 G 2 G/A 55.6/44.4 74/59 133 G 55.63909774 74 A 44.36090226 59 ConsensusfromContig1994 328 328 SNP 1 C 1 T 100 134 134 T 100 134 ConsensusfromContig147 54 54 SNP 1 A 1 G 96.3 130 135 G 96.2962963 130 ConsensusfromContig3270 132 43 SNP 1 A 2 G/A 51.1/48.9 69/66 135 G 51.11111111 69 A 48.88888889 66 ConsensusfromContig8703 87 74 SNP 1 G 1 A 99.3 134 135 A 99.25925926 134 ConsensusfromContig3299 94 94 SNP 1 A 2 A/G 56.5/42.8 78/59 138 A 56.52173913 78 G 42.75362319 59 ConsensusfromContig3451 196 52 SNP 1 C 2 C/T 54.3/45.7 75/63 138 C 54.34782609 75 T 45.65217391 63 ConsensusfromContig3229 361 346 SNP 1 T 2 T/C 60.7/39.3 85/55 140 T 60.71428571 85 C 39.28571429 55 ConsensusfromContig5612 34 34 SNP 1 A 2 A/C 54.3/45.7 76/64 140 A 54.28571429 76 C 45.71428571 64 ConsensusfromContig7542 199 178 SNP 1 T 2 C/T 61.4/38.6 86/54 140 C 61.42857143 86 T 38.57142857 54 ConsensusfromContig5829 177 173 SNP 1 G 2 G/T 61.7/38.3 87/54 141 G 61.70212766 87 T 38.29787234 54 ConsensusfromContig6502 483 461 SNP 1 A 2 A/G 60.6/39.4 86/56 142 A 60.56338028 86 G 39.43661972 56 ConsensusfromContig7256 288 257 SNP 1 G 1 A 91.5 130 142 A 91.54929577 130 ConsensusfromContig8703 348 335 SNP 1 T 1 C 66.9 95 142 C 66.90140845 95 ConsensusfromContig460 129 112 SNP 1 T 2 T/C 56.9/43.1 82/62 144 T 56.94444444 82 C 43.05555556 62 ConsensusfromContig3219 149 136 SNP 1 C 2 C/A 61.8/38.2 89/55 144 C 61.80555556 89 A 38.19444444 55 ConsensusfromContig5253 131 131 SNP 1 C 1 T 67.4 97 144 T 67.36111111 97 ConsensusfromContig6498 209 201 SNP 1 G 2 A/G 63.9/36.1 92/52 144 A 63.88888889 92 G 36.11111111 52 ConsensusfromContig7505 182 162 SNP 1 A 1 G 74.3 107 144 G 74.30555556 107 ConsensusfromContig3377 280 243 SNP 1 A 2 G/A 53.8/46.2 78/67 145 G 53.79310345 78 A 46.20689655 67 ConsensusfromContig7013 266 266 SNP 1 A 1 C 100 145 145 C 100 145 ConsensusfromContig3229 346 331 SNP 1 T 2 T/C 52.7/47.3 77/69 146 T 52.73972603 77 C 47.26027397 69 ConsensusfromContig7875 122 73 SNP 1 T 2 T/G 52.1/47.9 76/70 146 T 52.05479452 76 G 47.94520548 70 ConsensusfromContig9109 343 335 SNP 1 A 2 A/T 64.4/35.6 94/52 146 A 64.38356164 94 T 35.61643836 52 ConsensusfromContig261 45 45 SNP 1 C 1 T 100 147 147 T 100 147 ConsensusfromContig7875 143 94 SNP 1 G 2 G/A 52.4/47.6 77/70 147 G 52.38095238 77 A 47.61904762 70 ConsensusfromContig2196 34 34 SNP 1 T 1 C 90.5 134 148 C 90.54054054 134 ConsensusfromContig2776 226 198 SNP 1 C 1 T 73.6 109 148 T 73.64864865 109 ConsensusfromContig3203 13 5 SNP 1 T 1 C 100 148 148 C 100 148 ConsensusfromContig8624 129 122 SNP 1 A 2 A/C 55.4/44.6 82/66 148 A 55.40540541 82 C 44.59459459 66 ConsensusfromContig3377 481 444 SNP 1 C 1 G 72.5 108 149 G 72.48322148 108 ConsensusfromContig6070 128 128 SNP 1 C 1 T 72.5 108 149 T 72.48322148 108 ConsensusfromContig3219 152 139 SNP 1 T 2 T/C 52.7/37.3 79/56 150 T 52.66666667 79 C 37.33333333 56 ConsensusfromContig3451 258 114 SNP 1 A 1 C 79.3 119 150 C 79.33333333 119 ConsensusfromContig3038 52 52 SNP 1 G 2 A/G 53.9/46.1 82/70 152 A 53.94736842 82 G 46.05263158 70 ConsensusfromContig5877 647 635 SNP 1 T 1 C 84.3 129 153 C 84.31372549 129 ConsensusfromContig6481 239 239 SNP 1 G 1 A 100 153 153 A 100 153 ConsensusfromContig8624 131 124 SNP 1 C 2 C/T 55.6/44.4 85/68 153 C 55.55555556 85 T 44.44444444 68 ConsensusfromContig8969 225 225 SNP 1 G 2 G/A 53.6/46.4 82/71 153 G 53.59477124 82 A 46.40522876 71 ConsensusfromContig1428 204 202 SNP 1 C 2 T/C 50.6/49.4 79/77 156 T 50.64102564 79 C 49.35897436 77 ConsensusfromContig1528 71 71 SNP 1 A 2 A/G 56.7/43.3 89/68 157 A 56.68789809 89 G 43.31210191 68 ConsensusfromContig7667 140 140 SNP 1 C 1 T 67.5 106 157 T 67.51592357 106 ConsensusfromContig9044 197 172 SNP 1 A 1 G 100 157 157 G 100 157 ConsensusfromContig7937 309 296 SNP 1 A 2 G/A 61.4/38.6 97/61 158 G 61.39240506 97 A 38.60759494 61 ConsensusfromContig412 130 120 SNP 1 C 1 T 100 159 159 T 100 159 ConsensusfromContig2275 62 62 SNP 1 C 1 T 91.2 145 159 T 91.19496855 145 ConsensusfromContig6481 241 241 SNP 1 G 1 A 100 160 160 A 100 160 ConsensusfromContig2024 89 89 SNP 1 C 1 T 100 161 161 T 100 161 ConsensusfromContig7472 345 304 SNP 1 A 1 G 100 161 161 G 100 161 ConsensusfromContig3433 87 84 SNP 1 T 2 T/C 55.6/44.4 90/72 162 T 55.55555556 90 C 44.44444444 72 ConsensusfromContig6626 78 55 SNP 1 T 1 G 71 115 162 G 70.98765432 115 ConsensusfromContig8409 146 111 SNP 1 A 2 A/G 58.0/42.0 94/68 162 A 58.02469136 94 G 41.97530864 68 ConsensusfromContig8475 456 412 SNP 1 C 2 T/C 58.6/41.4 95/67 162 T 58.64197531 95 C 41.35802469 67 ConsensusfromContig703 216 185 SNP 1 T 2 C/T 60.7/39.3 99/64 163 C 60.73619632 99 T 39.26380368 64 ConsensusfromContig1065 592 541 SNP 1 N 1 A 100 163 163 A 100 163 ConsensusfromContig3203 288 280 SNP 1 A 1 C 79.1 129 163 C 79.14110429 129 ConsensusfromContig8171 302 294 SNP 1 C 1 G 88.3 144 163 G 88.34355828 144 ConsensusfromContig292 650 639 SNP 1 C 1 T 100 164 164 T 100 164 ConsensusfromContig1735 269 266 SNP 1 C 2 C/T 61.6/38.4 101/63 164 C 61.58536585 101 T 38.41463415 63 ConsensusfromContig6570 150 150 SNP 1 G 1 C 78 128 164 C 78.04878049 128 ConsensusfromContig7480 119 119 SNP 1 C 2 C/A 51.2/48.8 84/80 164 C 51.2195122 84 A 48.7804878 80 ConsensusfromContig3295 152 152 SNP 1 T 2 C/T 60.6/39.4 100/65 165 C 60.60606061 100 T 39.39393939 65 ConsensusfromContig275 176 153 SNP 1 G 2 G/A 55.4/44.6 92/74 166 G 55.42168675 92 A 44.57831325 74 ConsensusfromContig6498 302 294 SNP 1 G 1 C 73.5 122 166 C 73.4939759 122 ConsensusfromContig2655 80 47 SNP 1 T 2 T/A 55.1/44.9 92/75 167 T 55.08982036 92 A 44.91017964 75 ConsensusfromContig3581 254 254 SNP 1 A 1 T 89.2 149 167 T 89.22155689 149 ConsensusfromContig4898 72 72 SNP 1 G 2 G/A 51.5/48.5 86/81 167 G 51.49700599 86 A 48.50299401 81 ConsensusfromContig8877 59 55 SNP 1 A 2 A/G 64.7/35.3 108/59 167 A 64.67065868 108 G 35.32934132 59 ConsensusfromContig1901 57 40 SNP 1 N 1 T 100 168 168 T 100 168 ConsensusfromContig7209 291 281 SNP 1 G 2 G/T 53.6/45.8 90/77 168 G 53.57142857 90 T 45.83333333 77 ConsensusfromContig4573 532 457 SNP 1 G 1 A 100 169 169 A 100 169 ConsensusfromContig8152 461 406 SNP 1 G 2 G/A 50.9/49.1 86/83 169 G 50.88757396 86 A 49.11242604 83 ConsensusfromContig713 85 77 SNP 1 A 1 G 99.4 170 171 G 99.41520468 170 ConsensusfromContig1637 43 43 SNP 1 T 2 A/T 52.6/47.4 90/81 171 A 52.63157895 90 T 47.36842105 81 ConsensusfromContig2776 357 329 SNP 1 C 2 C/T 64.3/35.7 110/61 171 C 64.32748538 110 T 35.67251462 61 ConsensusfromContig160 107 87 SNP 1 T 2 T/C 59.3/40.7 102/70 172 T 59.30232558 102 C 40.69767442 70 ConsensusfromContig4152 244 207 SNP 1 A 2 G/A 52.3/47.7 90/82 172 G 52.3255814 90 A 47.6744186 82 ConsensusfromContig3295 161 161 SNP 1 G 2 A/G 50.9/49.1 88/85 173 A 50.86705202 88 G 49.13294798 85 ConsensusfromContig5734 137 121 SNP 1 A 2 A/T 63.8/36.2 111/63 174 A 63.79310345 111 T 36.20689655 63 ConsensusfromContig6304 191 165 SNP 1 C 2 C/T 58.6/41.4 102/72 174 C 58.62068966 102 T 41.37931034 72 ConsensusfromContig7265 152 152 SNP 1 T 2 T/C 55.2/44.8 96/78 174 T 55.17241379 96 C 44.82758621 78 ConsensusfromContig5705 254 53 SNP 1 T 2 C/T 50.3/49.7 88/87 175 C 50.28571429 88 T 49.71428571 87 ConsensusfromContig6539 310 279 SNP 1 A 2 C/A 57.7/42.3 101/74 175 C 57.71428571 101 A 42.28571429 74 ConsensusfromContig4024 262 229 SNP 1 A 2 C/A 51.1/48.9 90/86 176 C 51.13636364 90 A 48.86363636 86 ConsensusfromContig9005 293 257 SNP 1 C 1 T 100 177 177 T 100 177 ConsensusfromContig4019 84 84 SNP 1 C 1 T 88.2 157 178 T 88.20224719 157 ConsensusfromContig5237 262 251 SNP 1 T 2 T/C 53.9/46.1 96/82 178 T 53.93258427 96 C 46.06741573 82 ConsensusfromContig7989 245 204 SNP 1 C 2 C/T 55.6/44.4 99/79 178 C 55.61797753 99 T 44.38202247 79 ConsensusfromContig7548 35 10 SNP 1 T 2 T/G 64.6/35.4 117/64 181 T 64.64088398 117 G 35.35911602 64 ConsensusfromContig1348 319 280 SNP 1 C 1 T 73.8 135 183 T 73.7704918 135 ConsensusfromContig2118 117 117 SNP 1 T 1 C 80.9 148 183 C 80.87431694 148 ConsensusfromContig7007 139 131 SNP 1 T 1 C 83.1 152 183 C 83.06010929 152 ConsensusfromContig6570 118 118 SNP 1 T 2 C/T 53.8/46.2 99/85 184 C 53.80434783 99 T 46.19565217 85 ConsensusfromContig9253 45 10 SNP 1 T 1 G 85.9 158 184 G 85.86956522 158 ConsensusfromContig3727 278 278 SNP 1 A 1 G 100 185 185 G 100 185 ConsensusfromContig1231 508 203 SNP 1 T 1 G 71.5 133 186 G 71.50537634 133 ConsensusfromContig6044 144 144 SNP 1 T 2 T/C 64.7/35.3 121/66 187 T 64.70588235 121 C 35.29411765 66 ConsensusfromContig8447 154 134 SNP 1 G 1 T 82.9 155 187 T 82.88770053 155 ConsensusfromContig7048 11 5 SNP 1 T 1 C 100 189 189 C 100 189 ConsensusfromContig8969 226 226 SNP 1 A 2 A/G 60.8/39.2 115/74 189 A 60.84656085 115 G 39.15343915 74 ConsensusfromContig8703 338 325 SNP 1 G 1 A 70 133 190 A 70 133 ConsensusfromContig8145 444 438 SNP 1 C 1 T 99 189 191 T 98.95287958 189 ConsensusfromContig7548 248 223 SNP 1 C 2 T/C 51.6/48.4 99/93 192 T 51.5625 99 C 48.4375 93 ConsensusfromContig1637 203 203 SNP 1 A 2 C/A 52.3/47.7 101/92 193 C 52.33160622 101 A 47.66839378 92 ConsensusfromContig3203 19 11 SNP 1 A 1 G 74.2 144 194 G 74.22680412 144 ConsensusfromContig7505 217 197 SNP 1 G 2 A/G 62.4/37.6 121/73 194 A 62.37113402 121 G 37.62886598 73 ConsensusfromContig1637 205 205 SNP 1 C 2 G/C 50.3/49.7 98/97 195 G 50.25641026 98 C 49.74358974 97 ConsensusfromContig3329 289 289 SNP 1 A 2 T/A 56.4/42.6 110/83 195 T 56.41025641 110 A 42.56410256 83 ConsensusfromContig5734 268 252 SNP 1 G 2 A/G 55.6/44.4 109/87 196 A 55.6122449 109 G 44.3877551 87 ConsensusfromContig6639 49 40 SNP 1 A 2 A/G 52.6/47.4 103/93 196 A 52.55102041 103 G 47.44897959 93 ConsensusfromContig2987 202 202 SNP 1 G 2 G/A 52.0/48.0 103/95 198 G 52.02020202 103 A 47.97979798 95 ConsensusfromContig230 146 146 SNP 1 T 2 C/T 59.5/40.5 119/81 200 C 59.5 119 T 40.5 81 ConsensusfromContig8159 93 87 SNP 1 G 1 A 69.5 139 200 A 69.5 139 ConsensusfromContig426 245 209 SNP 1 G 2 G/A 64.2/35.8 129/72 201 G 64.17910448 129 A 35.82089552 72 ConsensusfromContig4152 187 150 SNP 1 T 2 T/C 50.7/49.3 102/99 201 T 50.74626866 102 C 49.25373134 99 ConsensusfromContig3727 153 153 SNP 1 A 2 A/G 55.2/44.3 112/90 203 A 55.17241379 112 G 44.33497537 90 ConsensusfromContig5734 354 338 SNP 1 A 2 A/G 52.2/47.8 106/97 203 A 52.21674877 106 G 47.78325123 97 ConsensusfromContig6060 55 55 SNP 1 C 2 T/C 52.2/47.8 106/97 203 T 52.21674877 106 C 47.78325123 97 ConsensusfromContig2645 104 104 SNP 1 C 1 G 74 151 204 G 74.01960784 151 ConsensusfromContig2655 67 34 SNP 1 G 2 T/G 52.7/47.3 109/98 207 T 52.65700483 109 G 47.34299517 98 ConsensusfromContig2776 303 275 SNP 1 C 2 C/T 58.2/41.8 121/87 208 C 58.17307692 121 T 41.82692308 87 ConsensusfromContig6116 134 124 SNP 1 A 1 G 99.5 207 208 G 99.51923077 207 ConsensusfromContig1696 428 403 SNP 1 T 2 T/C 60.8/39.2 127/82 209 T 60.76555024 127 C 39.23444976 82 ConsensusfromContig3578 470 457 SNP 1 A 1 C 70.8 150 212 C 70.75471698 150 ConsensusfromContig426 194 158 SNP 1 C 1 A 94.4 201 213 A 94.36619718 201 ConsensusfromContig8145 527 521 SNP 1 A 1 C 96.7 206 213 C 96.71361502 206 ConsensusfromContig6634 35 35 SNP 1 A 2 A/G 59.8/40.2 128/86 214 A 59.81308411 128 G 40.18691589 86 ConsensusfromContig8145 525 519 SNP 1 C 1 T 96.3 206 214 T 96.26168224 206 ConsensusfromContig5734 343 327 SNP 1 G 2 G/A 54.9/45.1 118/97 215 G 54.88372093 118 A 45.11627907 97 ConsensusfromContig6639 64 55 SNP 1 G 2 A/G 50.2/49.8 108/107 215 A 50.23255814 108 G 49.76744186 107 ConsensusfromContig5237 304 293 SNP 1 G 2 G/T 51.9/48.1 112/104 216 G 51.85185185 112 T 48.14814815 104 ConsensusfromContig3214 381 381 SNP 1 A 2 A/T 58.1/39.6 126/86 217 A 58.06451613 126 T 39.63133641 86 ConsensusfromContig8777 143 143 SNP 1 A 1 G 93.1 202 217 G 93.0875576 202 ConsensusfromContig3578 162 151 SNP 1 C 2 C/A 56.0/44.0 122/96 218 C 55.96330275 122 A 44.03669725 96 ConsensusfromContig1231 793 344 SNP 1 A 1 G 66.7 146 219 G 66.66666667 146 ConsensusfromContig716 398 366 SNP 1 G 2 A/G 54.1/45.9 119/101 220 A 54.09090909 119 G 45.90909091 101 ConsensusfromContig1065 478 427 SNP 1 G 1 A 100 220 220 A 100 220 ConsensusfromContig5253 176 176 SNP 1 A 1 C 72.4 160 221 C 72.39819005 160 ConsensusfromContig1650 268 167 SNP 1 C 2 C/A 52.7/47.3 117/105 222 C 52.7027027 117 A 47.2972973 105 ConsensusfromContig3270 559 470 SNP 1 A 2 A/G 59.5/40.5 132/90 222 A 59.45945946 132 G 40.54054054 90 ConsensusfromContig3623 76 76 SNP 1 A 2 A/G 50.5/49.5 112/110 222 A 50.45045045 112 G 49.54954955 110 ConsensusfromContig7810 290 278 SNP 1 A 2 A/G 55.4/44.6 123/99 222 A 55.40540541 123 G 44.59459459 99 ConsensusfromContig426 116 80 SNP 1 T 1 A 66.4 148 223 A 66.367713 148 ConsensusfromContig4114 218 201 SNP 1 G 1 T 98.7 220 223 T 98.65470852 220 ConsensusfromContig1528 191 191 SNP 1 A 1 C 73.7 165 224 C 73.66071429 165 ConsensusfromContig2438 500 295 SNP 1 C 2 T/C 64.4/35.6 145/80 225 T 64.44444444 145 C 35.55555556 80 ConsensusfromContig2678 124 124 SNP 1 C 2 A/C 50.2/45.3 113/102 225 A 50.22222222 113 C 45.33333333 102 ConsensusfromContig6044 108 108 SNP 1 G 1 A 75.6 170 225 A 75.55555556 170 ConsensusfromContig821 24 24 SNP 1 G 1 C 69.5 157 226 C 69.46902655 157 ConsensusfromContig460 171 154 SNP 1 T 2 T/C 62.3/37.3 142/85 228 T 62.28070175 142 C 37.28070175 85 ConsensusfromContig2010 297 297 SNP 1 C 1 T 98.3 227 231 T 98.26839827 227 ConsensusfromContig6343 47 47 SNP 1 A 2 T/A 55.4/44.6 128/103 231 T 55.41125541 128 A 44.58874459 103 ConsensusfromContig9036 278 278 SNP 1 G 2 T/G 51.1/48.9 118/113 231 T 51.08225108 118 G 48.91774892 113 ConsensusfromContig112 433 411 SNP 1 A 2 A/G 61.2/38.8 142/90 232 A 61.20689655 142 G 38.79310345 90 ConsensusfromContig5998 44 40 SNP 1 T 2 C/T 56.9/43.1 132/100 232 C 56.89655172 132 T 43.10344828 100 ConsensusfromContig8597 246 241 SNP 1 A 2 A/G 56.0/44.0 130/102 232 A 56.03448276 130 G 43.96551724 102 ConsensusfromContig1647 198 197 SNP 1 T 2 G/T 61.8/38.2 144/89 233 G 61.80257511 144 T 38.19742489 89 ConsensusfromContig3203 329 321 SNP 1 A 2 T/A 59.7/40.3 139/94 233 T 59.65665236 139 A 40.34334764 94 ConsensusfromContig6016 99 67 SNP 1 G 1 T 76.9 180 234 T 76.92307692 180 ConsensusfromContig8969 346 346 SNP 1 C 2 C/T 51.7/48.3 121/113 234 C 51.70940171 121 T 48.29059829 113 ConsensusfromContig2475 119 107 SNP 1 C 2 C/T 56.4/43.6 133/103 236 C 56.3559322 133 T 43.6440678 103 ConsensusfromContig3277 265 244 SNP 1 C 2 C/T 64.1/35.9 152/85 237 C 64.1350211 152 T 35.8649789 85 ConsensusfromContig9109 329 321 SNP 1 G 1 T 71.7 170 237 T 71.72995781 170 ConsensusfromContig6044 219 219 SNP 1 C 2 T/C 55.0/45.0 131/107 238 T 55.04201681 131 C 44.95798319 107 ConsensusfromContig5998 131 127 SNP 1 T 1 C 67.8 162 239 C 67.78242678 162 ConsensusfromContig8597 72 67 SNP 1 A 2 G/A 50.6/49.4 121/118 239 G 50.62761506 121 A 49.37238494 118 ConsensusfromContig3727 13 13 SNP 1 A 2 A/T 61.2/38.8 147/93 240 A 61.25 147 T 38.75 93 ConsensusfromContig8724 262 261 SNP 1 A 1 G 79.6 191 240 G 79.58333333 191 ConsensusfromContig3581 255 255 SNP 1 A 2 A/T 58.1/41.9 140/101 241 A 58.09128631 140 T 41.90871369 101 ConsensusfromContig7394 374 358 SNP 1 G 1 A 98.8 238 241 A 98.75518672 238 ConsensusfromContig8559 148 148 SNP 1 G 2 G/T 63.1/36.5 152/88 241 G 63.07053942 152 T 36.51452282 88 ConsensusfromContig8171 179 171 SNP 1 A 1 C 76.9 186 242 C 76.85950413 186 ConsensusfromContig292 86 86 SNP 1 G 2 G/T 59.7/40.3 145/98 243 G 59.67078189 145 T 40.32921811 98 ConsensusfromContig1569 167 155 SNP 1 T 2 A/T 53.9/46.1 131/112 243 A 53.90946502 131 T 46.09053498 112 ConsensusfromContig3270 198 109 SNP 1 G 2 A/G 50.8/49.2 125/121 246 A 50.81300813 125 G 49.18699187 121 ConsensusfromContig4791 119 119 SNP 1 C 1 T 99.6 245 246 T 99.59349593 245 ConsensusfromContig2475 422 410 SNP 1 C 1 T 66.8 165 247 T 66.80161943 165 ConsensusfromContig1994 205 205 SNP 1 G 1 A 99.6 247 248 A 99.59677419 247 ConsensusfromContig7322 71 71 SNP 1 T 2 T/G 56.4/43.6 141/109 250 T 56.4 141 G 43.6 109 ConsensusfromContig3219 308 295 SNP 1 C 1 T 91.7 232 253 T 91.69960474 232 ConsensusfromContig604 62 31 SNP 1 T 1 C 100 254 254 C 100 254 ConsensusfromContig1569 172 160 SNP 1 A 1 C 76 193 254 C 75.98425197 193 ConsensusfromContig7322 140 140 SNP 1 C 2 C/G 48.6/47.1 125/121 257 C 48.6381323 125 G 47.08171206 121 ConsensusfromContig3442 203 203 SNP 1 A 2 G/A 60.2/39.0 156/101 259 G 60.23166023 156 A 38.996139 101 ConsensusfromContig6539 298 267 SNP 1 G 2 G/T 55.8/44.2 145/115 260 G 55.76923077 145 T 44.23076923 115 ConsensusfromContig230 161 161 SNP 1 C 2 C/T 52.5/47.5 138/125 263 C 52.47148289 138 T 47.52851711 125 ConsensusfromContig3214 456 456 SNP 1 A 1 C 67.4 178 264 C 67.42424242 178 ConsensusfromContig7548 260 235 SNP 1 C 2 C/G 52.6/47.4 140/126 266 C 52.63157895 140 G 47.36842105 126 ConsensusfromContig8794 82 82 SNP 1 C 2 C/T 54.5/45.5 146/122 268 C 54.47761194 146 T 45.52238806 122 ConsensusfromContig1594 102 102 SNP 1 A 1 G 67.6 184 272 G 67.64705882 184 ConsensusfromContig2655 200 167 SNP 1 G 1 C 54.4 148 272 C 54.41176471 148 ConsensusfromContig6634 212 212 SNP 1 C 1 T 100 272 272 T 100 272 ConsensusfromContig1693 429 429 SNP 1 A 1 T 99.6 272 273 T 99.63369963 272 ConsensusfromContig3741 164 133 SNP 1 G 2 G/A 60.1/39.9 164/109 273 G 60.07326007 164 A 39.92673993 109 ConsensusfromContig8597 66 61 SNP 1 A 1 G 100 273 273 G 100 273 ConsensusfromContig6539 133 102 SNP 1 A 1 G 99.6 273 274 G 99.6350365 273 ConsensusfromContig7265 125 125 SNP 1 C 2 C/T 62.9/37.1 173/102 275 C 62.90909091 173 T 37.09090909 102 ConsensusfromContig1637 349 349 SNP 1 C 1 T 89.1 246 276 T 89.13043478 246 ConsensusfromContig7185 215 145 SNP 1 T 2 C/T 59.4/40.6 165/113 278 C 59.35251799 165 T 40.64748201 113 ConsensusfromContig2655 272 239 SNP 1 A 2 G/A 55.0/45.0 155/127 282 G 54.96453901 155 A 45.03546099 127 ConsensusfromContig3662 19 19 SNP 1 T 2 T/C 58.9/41.1 166/116 282 T 58.86524823 166 C 41.13475177 116 ConsensusfromContig3727 27 27 SNP 1 T 2 T/C 64.5/35.5 182/100 282 T 64.53900709 182 C 35.46099291 100 ConsensusfromContig7810 84 72 SNP 1 G 2 T/G 57.4/42.2 162/119 282 T 57.44680851 162 G 42.19858156 119 ConsensusfromContig8877 194 190 SNP 1 A 2 A/G 59.6/40.4 170/115 285 A 59.64912281 170 G 40.35087719 115 ConsensusfromContig426 203 167 SNP 1 C 1 G 99.3 285 287 G 99.30313589 285 ConsensusfromContig3270 477 388 SNP 1 T 2 T/G 56.8/43.2 163/124 287 T 56.79442509 163 G 43.20557491 124 ConsensusfromContig569 108 91 SNP 1 G 2 G/A 52.9/47.1 153/136 289 G 52.94117647 153 A 47.05882353 136 ConsensusfromContig8475 393 349 SNP 1 C 2 T/C 57.4/42.6 166/123 289 T 57.43944637 166 C 42.56055363 123 ConsensusfromContig6023 81 81 SNP 1 T 1 C 68.4 199 291 C 68.38487973 199 ConsensusfromContig7986 480 476 SNP 1 C 1 T 99.7 291 292 T 99.65753425 291 ConsensusfromContig1348 286 247 SNP 1 C 2 C/T 51.7/48.3 152/142 294 C 51.70068027 152 T 48.29931973 142 ConsensusfromContig3219 335 322 SNP 1 A 1 T 68.5 204 298 T 68.45637584 204 ConsensusfromContig8088 275 248 SNP 1 C 1 T 100 298 298 T 100 298 ConsensusfromContig6336 117 117 SNP 1 C 2 C/T 54.9/45.1 168/138 306 C 54.90196078 168 T 45.09803922 138 ConsensusfromContig3285 95 63 SNP 1 A 1 G 94.2 290 308 G 94.15584416 290 ConsensusfromContig3270 207 118 SNP 1 T 2 T/A 50.2/49.8 155/154 309 T 50.1618123 155 A 49.8381877 154 ConsensusfromContig6044 78 78 SNP 1 A 2 G/A 61.4/38.6 191/120 311 G 61.414791 191 A 38.585209 120 ConsensusfromContig4152 343 306 SNP 1 C 1 T 96.2 300 312 T 96.15384615 300 ConsensusfromContig5738 101 101 SNP 1 G 2 G/A 57.1/42.6 178/133 312 G 57.05128205 178 A 42.62820513 133 ConsensusfromContig8724 295 294 SNP 1 G 2 G/A 57.1/42.9 178/134 312 G 57.05128205 178 A 42.94871795 134 ConsensusfromContig5265 242 242 SNP 1 C 2 T/C 58.3/41.7 183/131 314 T 58.28025478 183 C 41.71974522 131 ConsensusfromContig7395 41 26 SNP 1 G 1 A 100 315 315 A 100 315 ConsensusfromContig8724 241 240 SNP 1 A 2 A/G 60.8/39.2 192/124 316 A 60.75949367 192 G 39.24050633 124 ConsensusfromContig3403 20 20 SNP 1 T 2 T/A 50.9/49.1 163/157 320 T 50.9375 163 A 49.0625 157 ConsensusfromContig6539 92 61 SNP 1 A 2 G/A 51.9/48.1 166/154 320 G 51.875 166 A 48.125 154 ConsensusfromContig7256 325 294 SNP 1 C 2 C/T 59.7/40.3 191/129 320 C 59.6875 191 T 40.3125 129 ConsensusfromContig9036 71 71 SNP 1 G 2 G/A 58.6/41.4 188/133 321 G 58.56697819 188 A 41.43302181 133 ConsensusfromContig8176 19 13 SNP 1 A 2 A/C 55.0/44.7 177/144 322 A 54.9689441 177 C 44.72049689 144 ConsensusfromContig6502 118 96 SNP 1 G 2 G/A 52.6/47.4 170/153 323 G 52.63157895 170 A 47.36842105 153 ConsensusfromContig3727 42 42 SNP 1 G 2 G/A 56.0/44.0 182/143 325 G 56 182 A 44 143 ConsensusfromContig1594 126 126 SNP 1 T 2 G/T 50.9/49.1 168/162 330 G 50.90909091 168 T 49.09090909 162 ConsensusfromContig6023 93 93 SNP 1 A 2 G/A 61.9/38.1 205/126 331 G 61.93353474 205 A 38.06646526 126 ConsensusfromContig5507 339 18 SNP 1 G 1 A 70.6 235 333 A 70.57057057 235 ConsensusfromContig2776 134 106 SNP 1 A 1 G 99.7 333 334 G 99.7005988 333 ConsensusfromContig147 192 192 SNP 1 T 2 C/T 60.3/39.7 202/133 335 C 60.29850746 202 T 39.70149254 133 ConsensusfromContig1623 241 241 SNP 1 A 1 G 77.6 260 335 G 77.6119403 260 ConsensusfromContig6044 117 117 SNP 1 G 2 G/T 62.1/37.9 208/127 335 G 62.08955224 208 T 37.91044776 127 ConsensusfromContig2064 210 198 SNP 1 A 1 G 93.2 314 337 G 93.17507418 314 ConsensusfromContig6453 56 56 SNP 1 G 2 G/A 56.0/43.7 191/149 341 G 56.01173021 191 A 43.69501466 149 ConsensusfromContig1994 207 207 SNP 1 C 1 T 84.9 292 344 T 84.88372093 292 ConsensusfromContig5734 232 216 SNP 1 G 2 A/G 54.5/45.5 189/158 347 A 54.46685879 189 G 45.53314121 158 ConsensusfromContig8609 305 302 SNP 1 G 2 G/A 57.5/42.5 200/148 348 G 57.47126437 200 A 42.52873563 148 ConsensusfromContig460 183 166 SNP 1 G 1 T 74.8 261 349 T 74.78510029 261 ConsensusfromContig8837 297 297 SNP 1 C 1 T 97.4 341 350 T 97.42857143 341 ConsensusfromContig8903 62 62 SNP 1 T 2 T/C 56.6/43.4 198/152 350 T 56.57142857 198 C 43.42857143 152 ConsensusfromContig4114 206 189 SNP 1 A 1 G 87.5 309 353 G 87.53541076 309 ConsensusfromContig8904 109 80 SNP 1 G 2 C/G 52.1/47.9 186/171 357 C 52.10084034 186 G 47.89915966 171 ConsensusfromContig2546 168 152 SNP 1 G 2 A/G 53.4/46.6 194/169 363 A 53.44352617 194 G 46.55647383 169 ConsensusfromContig6539 371 340 SNP 1 C 2 C/A 61.6/38.4 226/141 367 C 61.58038147 226 A 38.41961853 141 ConsensusfromContig2177 25 23 SNP 1 C 1 G 98.9 365 369 G 98.91598916 365 ConsensusfromContig1637 292 292 SNP 1 A 2 A/G 51.2/48.8 190/181 371 A 51.21293801 190 G 48.78706199 181 ConsensusfromContig6689 259 239 SNP 1 A 1 G 99.7 384 385 G 99.74025974 384 ConsensusfromContig660 70 41 SNP 1 C 1 T 98.5 382 388 T 98.45360825 382 ConsensusfromContig6060 214 214 SNP 1 G 2 T/G 51.2/48.8 200/191 391 T 51.15089514 200 G 48.84910486 191 ConsensusfromContig1594 127 127 SNP 1 T 2 T/G 53.8/46.2 212/182 394 T 53.8071066 212 G 46.1928934 182 ConsensusfromContig3270 306 217 SNP 1 A 2 A/G 55.8/44.2 221/175 396 A 55.80808081 221 G 44.19191919 175 ConsensusfromContig3880 381 147 SNP 1 C 2 C/A 50.5/49.2 200/195 396 C 50.50505051 200 A 49.24242424 195 ConsensusfromContig6658 99 91 SNP 1 C 1 T 100 396 396 T 100 396 ConsensusfromContig6502 121 99 SNP 1 T 2 T/C 53.8/46.2 214/184 398 T 53.76884422 214 C 46.23115578 184 ConsensusfromContig4152 441 404 SNP 1 C 1 T 66.3 266 401 T 66.33416459 266 ConsensusfromContig2524 78 49 SNP 1 A 1 G 99.8 402 403 G 99.75186104 402 ConsensusfromContig3270 459 370 SNP 1 T 2 T/C 63.9/36.1 260/147 407 T 63.88206388 260 C 36.11793612 147 ConsensusfromContig2678 238 238 SNP 1 C 2 C/G 63.9/35.9 262/147 410 C 63.90243902 262 G 35.85365854 147 ConsensusfromContig5774 83 83 SNP 1 A 2 G/A 50.1/49.9 206/205 411 G 50.1216545 206 A 49.8783455 205 ConsensusfromContig3991 356 326 SNP 1 A 1 G 99.3 412 415 G 99.27710843 412 ConsensusfromContig1594 350 350 SNP 1 T 2 T/G 56.3/43.7 236/183 419 T 56.32458234 236 G 43.67541766 183 ConsensusfromContig1014 18 14 SNP 1 C 2 C/G 61.5/38.5 260/163 423 C 61.46572104 260 G 38.53427896 163 ConsensusfromContig6539 121 90 SNP 1 C 2 T/C 53.9/46.1 229/196 425 T 53.88235294 229 C 46.11764706 196 ConsensusfromContig4019 120 120 SNP 1 C 1 T 100 433 433 T 100 433 ConsensusfromContig2655 220 187 SNP 1 C 1 T 100 435 435 T 100 435 ConsensusfromContig2118 68 68 SNP 1 G 2 G/C 64.0/36.0 279/157 436 G 63.99082569 279 C 36.00917431 157 ConsensusfromContig3295 35 35 SNP 1 A 2 A/C 62.7/37.0 276/163 440 A 62.72727273 276 C 37.04545455 163 ConsensusfromContig3880 376 142 SNP 1 T 2 T/C 52.7/47.3 233/209 442 T 52.71493213 233 C 47.28506787 209 ConsensusfromContig7265 91 91 SNP 1 C 2 C/T 54.0/46.0 250/213 463 C 53.99568035 250 T 46.00431965 213 ConsensusfromContig8597 213 208 SNP 1 C 2 C/T 54.4/45.6 252/211 463 C 54.42764579 252 T 45.57235421 211 ConsensusfromContig7265 101 101 SNP 1 G 2 G/C 54.0/45.8 252/214 467 G 53.9614561 252 C 45.82441113 214 ConsensusfromContig8152 488 433 SNP 1 G 2 G/A 64.3/35.7 302/168 470 G 64.25531915 302 A 35.74468085 168 ConsensusfromContig3277 301 280 SNP 1 C 2 C/T 59.8/40.2 283/190 473 C 59.83086681 283 T 40.16913319 190 ConsensusfromContig1528 310 310 SNP 1 C 2 C/T 57.8/42.0 274/199 474 C 57.80590717 274 T 41.98312236 199 ConsensusfromContig2252 164 136 SNP 1 C 1 T 78.3 371 474 T 78.27004219 371 ConsensusfromContig3295 41 41 SNP 1 C 2 T/C 56.3/43.7 267/207 474 T 56.32911392 267 C 43.67088608 207 ConsensusfromContig6453 89 89 SNP 1 T 2 G/T 61.2/38.6 290/183 474 G 61.1814346 290 T 38.60759494 183 ConsensusfromContig1637 229 229 SNP 1 C 1 T 70 334 477 T 70.02096436 334 ConsensusfromContig3727 314 314 SNP 1 G 2 C/G 62.8/37.0 305/180 486 C 62.75720165 305 G 37.03703704 180 ConsensusfromContig2475 296 284 SNP 1 G 2 G/A 60.4/39.6 294/193 487 G 60.36960986 294 A 39.63039014 193 ConsensusfromContig8903 182 182 SNP 1 A 2 G/A 59.2/40.8 289/199 488 G 59.22131148 289 A 40.77868852 199 ConsensusfromContig2546 171 155 SNP 1 C 2 C/T 60.2/39.8 297/196 493 C 60.24340771 297 T 39.75659229 196 ConsensusfromContig2655 257 224 SNP 1 C 2 C/T 50.5/49.5 250/245 495 C 50.50505051 250 T 49.49494949 245 ConsensusfromContig4114 316 299 SNP 1 A 2 A/G 61.9/38.1 307/189 496 A 61.89516129 307 G 38.10483871 189 ConsensusfromContig2475 257 245 SNP 1 T 1 C 67.1 336 501 C 67.06586826 336 ConsensusfromContig6060 199 199 SNP 1 C 2 C/T 57.0/43.0 286/216 502 C 56.97211155 286 T 43.02788845 216 ConsensusfromContig716 374 342 SNP 1 C 1 T 78 396 508 T 77.95275591 396 ConsensusfromContig4114 331 314 SNP 1 A 2 C/A 59.3/40.7 306/210 516 C 59.30232558 306 A 40.69767442 210 ConsensusfromContig1637 223 223 SNP 1 A 1 C 90.8 474 522 C 90.8045977 474 ConsensusfromContig8784 180 140 SNP 1 G 2 G/A 51.9/48.1 272/252 524 G 51.90839695 272 A 48.09160305 252 ConsensusfromContig3219 356 343 SNP 1 G 1 A 88 462 525 A 88 462 ConsensusfromContig8877 221 217 SNP 1 G 1 T 74.1 390 526 T 74.14448669 390 ConsensusfromContig8904 258 229 SNP 1 G 1 A 67.2 355 528 A 67.23484848 355 ConsensusfromContig1623 446 446 SNP 1 G 1 T 100 539 539 T 100 539 ConsensusfromContig5507 384 63 SNP 1 T 2 T/G 58.2/40.3 315/218 541 T 58.22550832 315 G 40.29574861 218 ConsensusfromContig8481 173 169 SNP 1 G 2 A/G 57.4/42.2 314/231 547 A 57.40402194 314 G 42.23034735 231 ConsensusfromContig5998 264 260 SNP 1 C 2 C/A 54.8/45.2 301/248 549 C 54.82695811 301 A 45.17304189 248 ConsensusfromContig6453 237 237 SNP 1 C 1 A 99.8 551 552 A 99.81884058 551 ConsensusfromContig2624 257 227 SNP 1 C 1 T 99.8 559 560 T 99.82142857 559 ConsensusfromContig3228 68 68 SNP 1 T 2 T/C 62.8/37.2 353/209 562 T 62.8113879 353 C 37.1886121 209 ConsensusfromContig5265 227 227 SNP 1 G 2 A/G 57.3/42.7 322/240 562 A 57.29537367 322 G 42.70462633 240 ConsensusfromContig6453 32 32 SNP 1 A 2 A/G 64.4/35.6 372/206 578 A 64.35986159 372 G 35.64013841 206 ConsensusfromContig6502 163 141 SNP 1 T 2 T/G 52.2/47.8 302/276 578 T 52.24913495 302 G 47.75086505 276 ConsensusfromContig8206 218 216 SNP 1 C 2 C/T 54.2/45.8 315/266 581 C 54.21686747 315 T 45.78313253 266 ConsensusfromContig3727 321 321 SNP 1 T 2 C/T 53.6/46.4 312/270 582 C 53.60824742 312 T 46.39175258 270 ConsensusfromContig1650 568 467 SNP 1 C 1 A 99.8 584 585 A 99.82905983 584 ConsensusfromContig1650 566 465 SNP 1 A 1 C 100 593 593 C 100 593 ConsensusfromContig3214 279 279 SNP 1 G 2 G/A 59.2/40.8 351/242 593 G 59.19055649 351 A 40.80944351 242 ConsensusfromContig7318 349 346 SNP 1 G 2 G/A 61.8/38.0 368/226 595 G 61.8487395 368 A 37.98319328 226 ConsensusfromContig3374 65 59 SNP 1 T 2 T/C 61.6/38.4 367/229 596 T 61.57718121 367 C 38.42281879 229 ConsensusfromContig7318 56 53 SNP 1 T 2 T/G 64.1/35.4 386/213 602 T 64.11960133 386 G 35.3820598 213 ConsensusfromContig1623 444 444 SNP 1 A 1 G 100 605 605 G 100 605 ConsensusfromContig8206 387 385 SNP 1 A 2 G/A 54.2/45.7 337/284 622 G 54.18006431 337 A 45.65916399 284 ConsensusfromContig4152 58 21 SNP 1 C 1 T 72.1 450 624 T 72.11538462 450 ConsensusfromContig3270 345 256 SNP 1 C 2 C/T 61.0/39.0 395/253 648 C 60.95679012 395 T 39.04320988 253 ConsensusfromContig8904 95 66 SNP 1 A 1 G 67.6 440 651 G 67.58832565 440 ConsensusfromContig1594 231 231 SNP 1 G 1 A 65.7 434 661 A 65.6580938 434 ConsensusfromContig4019 207 207 SNP 1 C 1 T 93.7 622 664 T 93.6746988 622 ConsensusfromContig6037 106 90 SNP 1 T 1 G 75.4 525 696 G 75.43103448 525 ConsensusfromContig2619 221 213 SNP 1 A 2 A/G 59.4/40.5 418/285 704 A 59.375 418 G 40.48295455 285 ConsensusfromContig6336 39 39 SNP 1 T 2 C/T 50.4/49.6 365/359 724 C 50.41436464 365 T 49.58563536 359 ConsensusfromContig3741 118 87 SNP 1 C 2 T/C 51.4/48.6 378/357 735 T 51.42857143 378 C 48.57142857 357 ConsensusfromContig2546 75 59 SNP 1 G 2 A/G 55.6/44.4 409/327 736 A 55.57065217 409 G 44.42934783 327 ConsensusfromContig4335 903 775 SNP 1 A 2 G/A 58.5/41.5 433/307 740 G 58.51351351 433 A 41.48648649 307 ConsensusfromContig8412 68 59 SNP 1 G 2 G/T 51.3/48.4 387/365 754 G 51.32625995 387 T 48.40848806 365 ConsensusfromContig6360 100 68 SNP 1 G 1 T 73.1 556 761 T 73.06176084 556 ConsensusfromContig4152 277 240 SNP 1 C 1 G 85.2 649 762 G 85.17060367 649 ConsensusfromContig3234 94 78 SNP 1 C 2 C/T 56.8/43.2 436/331 767 C 56.84485007 436 T 43.15514993 331 ConsensusfromContig8412 74 65 SNP 1 C 2 C/A 52.2/47.7 403/368 772 C 52.20207254 403 A 47.66839378 368 ConsensusfromContig5253 95 95 SNP 1 G 2 G/T 53.2/46.7 413/363 777 G 53.15315315 413 T 46.71814672 363 ConsensusfromContig6689 229 209 SNP 1 A 1 T 99.6 775 778 T 99.61439589 775 ConsensusfromContig6278 150 150 SNP 1 G 2 G/C 64.6/35.4 504/276 780 G 64.61538462 504 C 35.38461538 276 ConsensusfromContig3578 458 445 SNP 1 A 1 C 76.5 598 782 C 76.47058824 598 ConsensusfromContig7810 155 143 SNP 1 G 2 A/G 60.8/39.0 480/308 789 A 60.8365019 480 G 39.03675539 308 ConsensusfromContig1238 409 409 SNP 1 C 1 T 77.6 623 803 T 77.58405978 623 ConsensusfromContig8864 245 187 SNP 1 T 1 G 69.7 562 806 G 69.72704715 562 ConsensusfromContig8837 433 433 SNP 1 C 2 T/C 57.3/41.9 465/340 812 T 57.26600985 465 C 41.87192118 340 ConsensusfromContig6360 93 61 SNP 1 T 1 C 72.7 598 822 C 72.74939173 598 ConsensusfromContig5932 245 245 SNP 1 T 2 T/C 61.4/38.6 508/320 828 T 61.352657 508 C 38.647343 320 ConsensusfromContig6278 201 201 SNP 1 A 1 G 82.5 691 838 G 82.45823389 691 ConsensusfromContig6343 17 17 SNP 1 C 2 T/C 64.4/35.6 540/298 838 T 64.43914081 540 C 35.56085919 298 ConsensusfromContig7997 452 439 SNP 1 G 2 G/A 59.0/41.0 526/365 891 G 59.03479237 526 A 40.96520763 365 ConsensusfromContig2678 112 112 SNP 1 T 2 T/C 55.3/44.7 494/399 893 T 55.31914894 494 C 44.68085106 399 ConsensusfromContig3727 198 198 SNP 1 A 2 G/A 53.8/46.2 491/422 913 G 53.77875137 491 A 46.22124863 422 ConsensusfromContig2475 152 140 SNP 1 C 1 T 85.6 791 924 T 85.60606061 791 ConsensusfromContig5877 77 75 SNP 1 T 1 A 77.8 720 926 A 77.7537797 720 ConsensusfromContig3727 203 203 SNP 1 T 2 G/T 54.1/45.9 505/429 934 G 54.06852248 505 T 45.93147752 429 ConsensusfromContig8877 215 211 SNP 1 G 1 A 65.3 611 935 A 65.34759358 611 ConsensusfromContig1693 382 382 SNP 1 G 2 A/G 58.4/41.0 547/384 936 A 58.44017094 547 G 41.02564103 384 ConsensusfromContig2252 248 220 SNP 1 T 1 C 100 937 937 C 100 937 ConsensusfromContig1238 464 464 SNP 1 C 1 T 100 944 944 T 100 944 ConsensusfromContig8412 300 291 SNP 1 C 2 C/A 59.7/40.2 571/384 956 C 59.72803347 571 A 40.16736402 384